Detailed information on CNT30354656


BLAST search results

BLAST vs Swiss-Prot:
sp|Q332W7|YCF4_LACSA, E-value = 4e-113

BLAST vs NONCODE:
NONMEST002992, E-value = 1e-78

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677978Lactuca sativaSetaria viridis12.7425.3385.99364forward
CNT30199687Lactuca sativaPisum sativum3.5720.3690.2102forward
CNT3047368Lactuca sativaPrunus dulcis6.0923.6187.36174forward
CNT30589396Lactuca sativaMusa acuminata4.2431.2785.95121forward
CNT30610466Lactuca sativaGossypium raimondii12.2242.5183.67349forward
CNT30227829Lactuca sativaAnanas comosus4.1325.1189.83118forward
CNT30152456Lactuca sativaPrunus persica4.224.9587.5120reverse complement
CNT30323690Lactuca sativaAsparagus officinalis19.0421.3285.85544forward
CNT30149719Lactuca sativaBrachypodium distachyon2.2428.0792.1964forward
CNT30726954Lactuca sativaLupinus angustifolius19.3920.8688.81554forward

Expression of CNT30354656

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MSALTRMNVLKKPQLSYVMEKEHSCVFALLLRKHSGSFLKILQLVHARNRPIQQLFVPFPVE*

>peptide 2 (43 aa)
MNLSHSSTLCNLIFLSHVSSITSYRTYEFRKKYKNRQKIGMDK*

>peptide 3 (46 aa)
MNLEKNTKIDKKLEWINNKKNNVYLYLNSSNSKHISPFDECPEKLK*

>peptide 4 (38 aa)
MSGKKRHKFANYHYKRFNFLVIKEHKKYKNKLRKNYKI*

>peptide 5 (40 aa)
MRFCAIGSKQSCFFEHEEIKKPLRLPEILGLLKAPKQRES*

Sequence

>CNT30354656
AGATATAAAAGAGGAGTGAATGCTTTCTTTTTTTCCATTTTTTCATCTCTGAATTGTTAATGAACCTATCTCATTCGTCGACTCTATGTAATCTAATATT
TCTCTCCCACGTCAGTTCTATTACAAGTTATCGAACCTATGAATTTAGAAAAAAATACAAAAATAGACAAAAAATTGGAATGGATAAATAATAAAAAAAA
TAATGTTTACCTATATCTCAATTCGTCAAATTCGAAGCACATATCTCCTTTCGATGAATGCCCAGAAAAATTGAAATAATGAATAATATTATTCAGATTT
TGAGACGAAAGAACTCCTTTTCTATCATTATATAAAAATCTCTAATATTTCGAAAAAATTGAACTTACTATGAGTAGTCAGGGATAGAATAATTGAGGGA
AATTTCTGAAGAATATTGTGAAAAATGAGTGGCAAAAAACGACATAAATTTGCTAATTATCATTATAAGAGATTCAATTTTTTGGTCATTAAGGAGCACA
AAAAGTATAAAAATAAGCTTCGAAAAAATTACAAGATATGATCTCTAAAGTTTCAATTCCAACAAGTTAAAAAGGGTGGAATTTCCTTATTTCTAAATGG
TTGATTATGAGATATTTCGATTTGTTTCTTATATTTTTTATTGAATTGAGTTATGAAATATCAATGGCTTCGTAAGAATATAAGCAATCTGCAAAGTGAA
TAGTTTTTTTTATACTTGTTCCATATATGTCTGCTTTGACTCGAATGAATGTTCTGAAGAAACCTCAATTAAGTTATGTTATGGAAAAAGAGCATTCTTG
CGTTTTTGCCCTCCTGCTGAGAAAGCATTCCGGCTCATTTCTTAAAATACTTCAATTGGTACACGCAAGAAATAGGCCAATTCAGCAGCTTTTTGTTCCA
TTTCCCGTGGAGTAAAATTCTCATCAGTACGAGTCAATGGAATGGCTCCCTGGCCTCTGATATCCATATAAAGGACACGACGAGCATAAATACCTTCTTT
CACTTCTATTCTGACAGACTGAATATCTTTTATAAGAAATTGGAGGAAGACCCGACGATTTTTTCCAGGAAATCCCCAACGAAAGATACACACTATTCCG
TCTTTTCTATCAAATCGATCATAACCACTACCTACATTCCACGAAATTGTGCACCATAAATAGGAGCTAATAAAAAGACCCGCGATTCCGTAGAAAGACA
TCACAATTCCTTGTGGAAAAAAAACTATTTCCTGAGACGGAAATAAAGATATCAAATTTCTACCAAGATAACTCGAGGTTCCAACCAACAAGAATCCTAA
TGAACCTAAAAAAAGGATAACAGCCCAGCAGAAATTACTTGTTTTTCGAGCCCCCGTTATAGGTTCTATCCATATATGTTCTGATCGACAACTCATACTT
GATCCAGTTGATTTTTTTGGAATTGAGAGAATACCCCAAATGAATTTGACTTTAGTCCTTTTTTTTTCCGAAGTAACTCGCATCAACTAGCACTAGTTTG
ATGTGATCCTTTAGGAGTAATTCATTAAATTCGTTAGATCTAAACTAATAACATACCCTTCGTACGATCTCACTAAAGATAGCCAAATAGATAGACCAAC
TTTACAGTTCAGCTATCCGTCAATTCGGGTCTATTTGAAAATAGCTAGAATCCATTGATCCCTATAGCATTTTCTGGAGACATAAGAGTTTTTCGGCGGA
AGCCGCTTATACCATATTTTGCTAAATAGATATCTGTGTTATGATACAAGCGTCAGTTTTGAAAAAAAAAATAGATGAGATTTTGTGCCATCGGCTCTAA
ACAATCTTGTTTTTTTGAACATGAAGAAATAAAGAAGCCATTGCGATTGCCGGAAATACTAGGCCTACTAAAGGCACCAAAACAGAGGGAAAGTTAAGAG
TTGTCATAGAATGGCTACCTCGATTTACTATTTGTACCTGTTATTATTATTTATATTTTATATTTATAATATAAAGATATCTTATTATATATAAAGATAT
CTTATTATAATTTGATAATTCTAAATTGGAATTATTATTATTACTTAATAGCTATTAAGTATAAATATAAGTATCTATCTAAGTGAGTATATAATGTAGT
TTTTGATCTTTCTACATGAAAGATTTGAAAGGATATGGATGAGATATTATTTTCTTCATTTTTTGCTCTTGTCTTCGAATTTCATTTACTAAGCAAAAAG
TTTCTTAAAAATTAATTAGATTCTATTTATATTGAATATATTGAAGGGTTTGTTAGAATCCCATCCATCAGGGATTCTTAGTCAAAATAGGATTATCGTA
AGATATAAAAAAAAGAAAAAATTCTATATTTTATAGATTTTCATTATATATGACGAGAAGAGTATATTTTTTTGATTTGCCTAATTTCACGAAAATAAGA
ATTTCATCTTTTATCTTGTTAATAGAGGCTTCTTGATCAATAATCAGGAATATAGAAAAAGGGGCGGATTTTCTGTGACTTTTTATTCTTTATATAATTA
GATCTTATGCCAACAAAGAAAACCCCATTCGTCTAATTTTAACTTGGATTCCGATAAACTAATTACTTGTTTGCTCAAAATAATTGAACTTAATGTTCTA
ATTTTGATTCAAAGGAAAGAAAGTGTGTAGTTGAAATAACTCACTCAGAACGCTTTTTAAAGGATTACGTGGTACGATTAGATCGAATAAGCCTTTCTGG
AATAAATACTCGGCCGCTTGTGAACCCTCGGGTACTGTTTTATTCAATGTTTGTTCAATTACTCTTTTACCCGCAAAGGCAATGTAGGCATTGGGTTCGG
CAATAATGATATCCCCCAACATACCAAAACTAGCTGTCACCCCACCGGTAGTAGGAG