Detailed information on CNT30354556


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522951Eragrostis tefSetaria italica53.1419.3489.35169reverse complement
CNT30580030Eragrostis tefEchinochloa crusgalli54.0922.1186.05172reverse complement

Expression of CNT30354556

Peptides detected in this lncRNA

>peptide 1 (39 aa)
CRSKRYKFARCGHTNSATKQRRRVTNSLSILATRRERDG*

>peptide 2 (67 aa)
MADYYGGRTMYSNTDECYDVGKHGSRRTYSHTDERYDDVDRRRPGGYADDCYDGGYRQTAVYSDEYSR

Sequence

>CNT30354556
TGTCGCTCCAAGCGCTATAAATTCGCCCGTTGCGGCCACACAAACTCTGCAACCAAGCAACGCCGACGTGTCACAAACAGTTTGAGTATACTAGCAACAA
GAAGAGAGAGAGATGGCTGACTACTACGGCGGCAGGACGATGTACTCCAACACGGACGAGTGCTACGACGTGGGCAAGCACGGCAGCCGGAGGACGTACT
CGCACACCGACGAGCGCTACGACGACGTCGACCGTAGGAGGCCGGGGGGCTACGCCGACGACTGCTACGACGGCGGGTACAGGCAGACCGCCGTCTACTC
CGACGAGTACTCTCGCGG