Detailed information on CNT30353933


BLAST search results

BLAST vs Swiss-Prot:
sp|B3TN55|NDHK_BRADI, E-value = 8e-72

BLAST vs NONCODE:
NONATHT000568, E-value = 2e-17

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555485Eragrostis tefOryza glaberrima21.037.5396.8194reverse complement

Expression of CNT30353933

Peptides detected in this lncRNA

>peptide 1 (46 aa)
APIAMTYFGSGICSYNRTKEGAIFIVTVPAVKIRSACLGLDLGTNP*

>peptide 2 (71 aa)
MKQQLVPYRRGHKLESLDQFERSFGVVEITELELVWSSNGNSIKLITVSMESFPSFFFLSEYSVKTIPRLP*

Sequence

>CNT30353933
GCTCCCATAGCAATGACGTATTTTGGTTCAGGCATTTGTTCATATAATCGCACTAAAGAGGGAGCCATTTTCATTGTTACCGTACCGGCTGTTAAAATTA
GGTCCGCTTGCCTAGGACTTGATCTTGGTACCAATCCATAACGATCAAAGTCGAATCGTGAGCCTATTAATGAAGCAAATTCAATGAAACAACAACTGGT
ACCGTATAGAAGGGGCCATAAACTGGAGAGTCTTGACCAATTCGAAAGATCATTTGGTGTAGTTGAAATAACGGAATTGGAACTTGTTTGGTCAAGTAAC
GGAAACTCAATCAAACTCATAACTGTCTCAATGGAATCTTTTCCTTCTTTTTTTTTTTTGTCTGAATATTCAGTTAAGACCATTCCAAGGCTCCCATAGC
AATGACGTATTTTGGTTCAGGCATTTGTTCATATAATCGCACTATAG