Detailed information on CNT30353463


BLAST search results

BLAST vs Swiss-Prot:
sp|O23254|GLYC4_ARATH, E-value = 5e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677187Eragrostis tefSetaria viridis16.1477.1692.38223forward
CNT30494159Eragrostis tefOlea europaea7.0235.7983.5197forward
CNT30180691Eragrostis tefSecale cereale7.8134.0787.96108forward
CNT30436120Eragrostis tefAegilops tauschii17.1548.0790.72237forward
CNT30449919Eragrostis tefSaccharum spontaneum10.4229.2781.94144forward
CNT30134938Eragrostis tefLolium perenne15.1238.4287.56209forward
CNT3022185Eragrostis tefPopulus trichocarpa9.3321.9886.05129forward
CNT30117829Eragrostis tefOryza nivara11.7227.0593.83162forward

Expression of CNT30353463

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MAYNHYILPMWDIKLPLGKKRALGSLIDRITNK*

>peptide 2 (35 aa)
CQERRKNSSYGFTRGKQKPQAYYWQTTDLHFFFPK*

>peptide 3 (64 aa)
MYSSYGRRGKTTRIQHSVLNFGLAPLLSMVRGCPLGQASLLSWPTITIYFQCGTLSCHLVKRGH*

>peptide 4 (87 aa)
MLYSLYFMLSRVNPGMSKESANFSTSALRFSMSLLFTRPLLKSLRSLPYSFWMFRQIVTAWWRNSPICSKSFSTRPLEVIAGAPAKP*

>peptide 5 (50 aa)
MEGGGKPQEFNTPFLTLDLHHCYQWSGAVHLDKHHCYHGLQSLYTSNVGH*

>peptide 6 (50 aa)
AKKDGRTQAMDLPGASRNHRPIIGKQPTYIFFFPNDSKRKIPKRKLNWWN*

>peptide 7 (42 aa)
MGVMFQILRNNFGSKIVLTFSMTMPLFQTGLPFPLTLFNVTC*

>peptide 8 (45 aa)
PRKTEELKLWIYQGQAETTGLLLANNRLTFFFSQMIPNERFLKEN*

>peptide 9 (37 aa)
MNLLSDEQTKSIRHHHWGGDAKAERHIVGDGESRAGG*

>peptide 10 (30 aa)
MQTMEFKIPIWLDSNLNYQVIKFCKNYTMY*

Sequence

>CNT30353463
TGCCAAGAAAGACGGAAGAACTCAAGCTATGGATTTACCAGGGGCAAGCAGAAACCACAGGCCTATTATTGGCAAACAACCGACTTACATTTTTTTTTTC
CCAAATGATTCCAAACGAAAGATTCCTAAAAGAAAATTAAATTGGTGGAACTGAGGGAGGCAACCAAACCAGGGAGAGGCAGGAAGCGTTTATGAACCTA
TTATCTGACGAGCAGACAAAATCCATAAGGCATCATCATTGGGGCGGCGACGCGAAGGCAGAGCGGCACATCGTAGGAGACGGGGAGAGCAGAGCGGGTG
GATGATTAATACAGGAGGGCTCGCCGTGCTGTGATGCTCTACTCCTTGTACTTCATGCTCTCGAGGGTAAACCCAGGCATGTCGAAGGAATCAGCAAACT
TCTCAACCTCGGCCCTGAGGTTCTCAATGTCCTTGTTGTTCACCAGGCCCTTGTTGAAGTCCTTGAGGAGCTTGCCGTACTCCTTCTGGATGTTCAGGCA
GATAGTCACCGCCTGGTGGAGGAACTCGCCGATCTGCTCAAAGTCCTTCTCGACCAGACCCCTAGAAGTCATCGCAGGTGCACCTGCAAAACCATAGCCA
GAACCCGTCAACCATTTGTTGCATCATTTCAGCAAGTTTTGTAACAAAGAACAGTGAAATATATTGTTCCATCAAACGAAAGCGGTAAGGATATTCTTCG
ACTTAAAGGTTCAAGTTCAAATCTTTGGTCACATTTCTAATGCAGACCATGGAATTTAAGATACCAATATGGCTAGATTCTAATCTTAACTATCAGGTCA
TCAAATTTTGTAAGAACTACACAATGTATTAGTAGGAAAATGTGAAAGAGTAGCTAACTGAAATGGCACAATTATTAATCTACCTTCAGTTGCTAGGTGA
TCTAGTTGTGCTTTGGAAGCATGTATAGTTCATATGGAAGGAGGGGGAAAACCACAAGAATTCAACACTCCGTTCTTAACTTTGGACTTGCACCATTGTT
ATCAATGGTCAGGGGCTGTCCACTTGGACAAGCATCATTGTTATCATGGCCTACAATCACTATATACTTCCAATGTGGGACATTAAGTTGCCACTTGGTA
AAAAGAGGGCATTAGGATCACTTATTGATCGCATTACAAACAAATGACTGAAATACTGAAAGTCTAATATTTTTCAGAAGTCATTTTGTTGATGAAAAGA
CAAGAATCATCAAGAGGCGCTGTTTAAAAATGGGAGTTATGTTTCAAATCCTTAGAAACAACTTTGGTTCCAAAATAGTCCTAACATTTTCTATGACAAT
GCCCCTCTTCCAAACAGGCCTGCCTTTTCCACTAACCTTGTTCAATGTGACTTGTTAATAACATCACAGTAATAAATTATTG