Detailed information on CNT30352211


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690361Eragrostis tefOryza sativa38.1812.0582.85239forward
CNT30580009Eragrostis tefEchinochloa crusgalli48.8823.1381.05306forward
CNT30594890Eragrostis tefEragrostis curvula42.0124.0487.45263forward

Expression of CNT30352211

Peptides detected in this lncRNA

>peptide 1 (53 aa)
ARRQTVESPHGMFAKGPLNLDSDPNISKTPLKWIAINNRDPSIYIKVPIFDRE*

>peptide 2 (46 aa)
MPCAPGHSAVGSRLWRQVVDPPCNAQSNLLELVPRETLLRREDVPV*

>peptide 3 (42 aa)
MFDNVIQRSPWLSLSRPRLLSAPPSCPVRQVTPPSGHGCGAR*

>peptide 4 (31 aa)
MNSSPLHLELLNILMATYTLPRRNPLYTEPYP

>peptide 5 (31 aa)
MPKAISLSLSQEKRFSEEKMYLSREPLGMYS*

Sequence

>CNT30352211
ACGCCCGGCGTCAAACCGTCGAGTCGCCGCACGGAATGTTTGCAAAAGGACCCCTGAATTTGGATAGCGATCCAAATATTTCAAAAACACCCCTCAAATG
GATCGCGATTAATAATCGCGATCCATCTATTTACATAAAAGTCCCTATTTTTGATCGCGAGTAACGAACGCGATCCAAATATTGATAAATTAACCCTCAT
GTTTGATAATGTCATACAAAGAAGTCCCTGGCTATCTCTCTCCCGTCCTCGACTCCTGAGCGCGCCGCCTTCATGCCCTGTGCGCCAGGTCACTCCGCCG
TCGGGTCACGGCTGTGGCGCCAGGTAGTTGATCCCCCTTGCAATGCCCAAAGCAATCTCCTTGAGCTTGTCCCAAGAGAAACGCTTCTCCGAAGAGAAGA
TGTACCTGTCTAGAGAGCCATTAGGCATGTACTCATAGACAAGCGCCCTTCTCATTTCCTCGGAGCAGAACCCCAGGAGACGCACCACATTGACGTGGTG
GATCCTCCCAATTGTGGAAACCTCGCTAATGAACTCCTCTCCATTGCATTTGGAGTTGCTCAACATCTTGATGGCAACATATACATTGCCTCGTAGGAAC
CCCTTGTACACGGAGCCATATCCTCC