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Detailed information on CNT30351769


BLAST search results

BLAST vs Swiss-Prot:
sp|P18566|RBS2_ORYSJ, E-value = 2e-75

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30300848Eragrostis tefTriticum aestivum39.7953.6682.49337forward
CNT30664522Eragrostis tefTriticum dicoccoides39.7958.181.6337forward
CNT30684606Eragrostis tefTriticum urartu39.7945.1181.9337forward
CNT30721860Eragrostis tefTriticum spelta39.6758.5481.55336forward
CNT30150944Eragrostis tefBrachypodium distachyon33.8842.9685.02287forward

Expression of CNT30351769

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MTLAGVGERYRLHKQAMDTAEATKKTKEKETR*

Sequence

>CNT30351769
AGGAAATTAACATCCAAGAGAGTAGTGATTAGTGAAGCACATGCATCGGAAAACATGAACTGAAACTTTCTTCTTTATTATTAGAGACGTATAGTAGCCA
AGACAATAACACCAGTACTACTTAACAGGATCTAGTATTGTCGACGGATTTGTGGGATATGCTCTATACATATCATATCTCTGTATAGCCGGAGCTTGCA
TTCACATGTTTCTCACCCAACGATAGTTGTAGTACTAGTCCTACGTACGTAGATGACTCTGGCTGGGGTCGGAGAGAGATATCGCTTACATAAGCAGGCC
ATGGATACAGCAGAAGCAACCAAAAAAACAAAAGAAAAGGAAACTCGATGAGGTGACCCCAAGCAAAACCGAACAGCAGGCAGGCAGTTCAGTACGGTTG
CTGCTCACGCACCACCAGCGAGCGAGGCTAGATGCGCGCTTAATTACTCCTTGCCCGGTGGCTTGTAGGCGATGAAGCTGATGCACTGCACCTGCCTGAC
GTTGTCGAATCCGATGATGCGGATGTAGGAGCCCGGGTATGCGGCCTTGGCCTCCTCGAGCTCCTTGAGCACCTGGGTGGCGTCGGTGCAGCCGAACATG
GGCAGCTTCCACATGGTCCAGTAGCGGCCGTCGTAGTACCCCGGGGACTGGGAGTTCTCGCGGAACACGAAGCCGACACTGCTGAACTCGAGGCAAGGGA
TCCAGTTGTTGCGGAGGAGGTACTCCACCTGCTTCAGGAAGTCCTCGGGGGTCAGCGGCGGCAGGTACGACAGCGTCTCGAACTTCTTGTTGTTGTCAAC
AGGCCACACCTGGAAACAAAAAATGGCATTGATATATCGAGGTCAGA