Detailed information on CNT30351500


BLAST search results

BLAST vs Swiss-Prot:
sp|Q940H8|FRL4B_ARATH, E-value = 1e-29

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30143000Eragrostis tefLolium perenne63.2527.3882.64265forward
CNT30116193Eragrostis tefOryza nivara37.7113.7586.71158forward

Expression of CNT30351500

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MLPFSSLSWPSPALQAASEDPPEETRLQAYGPQHTL*

>peptide 2 (69 aa)
MRLLAGPLLPPLEALDAAFFFSVLAFSSSSSCFRRSSRGNSASSLRSSTHFITARSADCSFLFTLLCKMH

Sequence

>CNT30351500
TGATGTGTGAGATGGGGAGGTTGTGGCATACGATGCATGGGTAGGGGAGGCCGTGGCATACGATGTGTGGGAAGGGGAGGCCGTGGCGTATGATGCGTGG
GAAGGAGAGTGGGCAAATGTGGTAGGAGCTGGGAAAGAAGACACACAAGCATTGTTAGCGAGACGACCTGCCTTAGCTGGAGGCATTGGACCCCCATTGC
TTGCGCGAATGCGTTTATTAGCAGGGCCACTGCTTCCACCACTCGAAGCACTCGATGCTGCCTTTTTCTTCTCTGTCTTGGCCTTCTCCAGCTCTTCAAG
CTGCTTCCGAAGATCCTCCAGAGGAAACTCGGCTTCAAGCTTACGGTCCTCAACACACTTTATAACAGCTCGCAGCGCTGACTGCTCTTTCTTATTCACA
TTGCTCTGCAAGATGCATA