Detailed information on CNT30351495


BLAST search results

BLAST vs Swiss-Prot:
sp|Q940H8|FRL4B_ARATH, E-value = 4e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30102775Eragrostis tefOryza rufipogon65.932.184.97286forward
CNT30576925Eragrostis tefOryza barthii71.4334.6484.52310forward

Expression of CNT30351495

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MLPFSSLSWPSPALQAASEDPPEETRLQAYGPQHTL*

>peptide 2 (64 aa)
MRLLAGPLLPPLEALDAAFFFSVLAFSSSSSCFRRSSRGNSASSLRSSTHFITARSADCSFLFTL

>peptide 3 (30 aa)
MCGKGRLWYMMHGKGRMWRMMCGKESGQMW*

Sequence

>CNT30351495
TGATGTGTGAGATGGGGAGGTTGTGGCATACGATGCATGGGTAGGGGAGGCCGTGGCATACGATGTGTGGGAAGGGGAGGCTGTGGTATATGATGCATGG
GAAGGGGAGGATGTGGCGTATGATGTGTGGGAAGGAGAGTGGGCAAATGTGGTAGGAGCTGGGAAAGAAGACACACAAGCATTGTTAGCGAGACGACCTG
CCTTAGCTGGAGGCATTGGACCCCCATTGCTTGCGCGAATGCGTTTATTAGCAGGGCCACTGCTTCCACCACTCGAAGCACTCGATGCTGCCTTTTTCTT
CTCTGTCTTGGCCTTCTCCAGCTCTTCAAGCTGCTTCCGAAGATCCTCCAGAGGAAACTCGGCTTCAAGCTTACGGTCCTCAACACACTTTATAACAGCT
CGCAGCGCTGACTGCTCTTTCTTATTCACATTGC