Detailed information on CNT30350914


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9M0Y5|MYB74_ARATH, E-value = 1e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30689913Eragrostis tefOryza sativa30.866.7381.75137forward
CNT30218110Eragrostis tefKalanchoe fedtschenkoi24.5525.2982.57109forward
CNT30106800Eragrostis tefOryza longistaminata22.758.3283.17101forward

Expression of CNT30350914

Peptides detected in this lncRNA

>peptide 1 (41 aa)
SVLPGSLVAMDDHLFPSAECSWMISFSSSSVNRPRLMSGRR*

>peptide 2 (98 aa)
VRPPGQLGGDGRPLVPQRRVQLDDQLLLLLREPAPLDVRPQVVGPPEAAALAAPVQPGQLRQTAPAAVPVLVDVVHQKLVLLRSPRALLHAGILLAAR*

Sequence

>CNT30350914
GTCCGTCCTCCCGGGCAGCTTGGTGGCGATGGACGACCACTTGTTCCCCAGCGCCGAGTGCAGCTGGATGATCAGCTTCTCCTCCTCCTCCGTGAACCGG
CCCCGCTTGATGTCCGGCCGCAGGTAGTTGGTCCACCGGAGGCGGCAGCTCTTGCCGCACCGGTTCAGCCCGGCCAGCTTCGGCAGACGGCGCCAGCTGC
CGTGCCCGTGCTGGTTGATGTAGTCCACCAGAAGCTTGTCCTCCTCCGGAGTCCACGGGCCCTTCTTCACGCCGGCATCCTGCTCGCAGCAAGGTGACCG
ACCCATATTCCTCTCTTGCCTCTTGGTTAATTTCTCTCTTGCGTGCGTGTGAGCTAGCTAGTTAGCTAGCTAGGAGGAGAGATGTATGGAGTTTCTTAGC
CTGGCTGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGGATTCG