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Detailed information on CNT30350898


BLAST search results

BLAST vs Swiss-Prot:
sp|O64937|EF1A_ORYSJ, E-value = 0.0

BLAST vs NONCODE:
NONBNAT001751, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691950Eragrostis tefOryza sativa78.955.8192.83879forward
CNT30672814Eragrostis tefSetaria viridis62.7565.5790.56699forward
CNT30521308Eragrostis tefSetaria italica78.6478.4291.78876forward
CNT30639730Eragrostis tefNymphaea colorata48.7459.0985.08543forward
CNT30535563Eragrostis tefEucalyptus grandis70.4796.285.48785forward
CNT30316757Eragrostis tefCorylus avellana66.1661.5286.57737forward
CNT30546799Eragrostis tefIpomoea triloba77.3870.286.89862forward
CNT30518094Eragrostis tefJuglans regia72.3586.1185.73806forward
CNT30377782Eragrostis tefArabidopsis thaliana61.5867.9286.01686forward
CNT30618435Eragrostis tefSesamum indicum31.2470.8887.07348forward
CNT30274113Eragrostis tefChenopodium quinoa38.5168.7584.85429forward
CNT3021232Eragrostis tefCitrullus lanatus74.9667.4584.31835forward
CNT30727590Eragrostis tefCorchorus capsularis78.2864.3587.96872forward
CNT30380230Eragrostis tefManihot esculenta78.2835.9485.44872forward
CNT30525464Eragrostis tefPhaseolus vulgaris52.33103.1982.68583forward
CNT30629544Eragrostis tefVigna unguiculata35.5552.3887.12396forward
CNT30194937Eragrostis tefPisum sativum78.5587.5983.43875forward
CNT30160120Eragrostis tefPistacia vera78.9970.887.84880forward
CNT30287202Eragrostis tefTriticum aestivum41.8364.8189.27466forward
CNT30387246Eragrostis tefTriticum turgidum78.976.3787.71879forward
CNT30564256Eragrostis tefActinidia chinensis54.5852.2387.5608forward
CNT3084148Eragrostis tefVigna radiata50.5434.5685.61563forward
CNT30541587Eragrostis tefBrassica napus77.0272.9685.78858forward
CNT30233904Eragrostis tefBrassica oleracea77.2993.8985.6861forward
CNT30173274Eragrostis tefTrifolium pratense75.5862.685.99842forward
CNT30146334Eragrostis tefMedicago truncatula55.9262.6885.71623forward
CNT30246955Eragrostis tefAvena sativa78.949.890.67879forward
CNT30665783Eragrostis tefTriticum dicoccoides75.2291.9987.59838forward
CNT30310177Eragrostis tefCamelina sativa78.2875.1786.47872forward
CNT3059230Eragrostis tefArabidopsis lyrata78.2872.5586.47872forward
CNT3078925Eragrostis tefBrassica juncea78.2874.4786.12872forward
CNT30614135Eragrostis tefArabis alpina65.7146.9286.89732forward
CNT30449495Eragrostis tefSaccharum spontaneum79.5372.890.29886forward
CNT30132437Eragrostis tefLolium perenne78.973.1387.26879forward
CNT3011166Eragrostis tefZea mays78.8262.0990.32878forward
CNT30608730Eragrostis tefGossypium raimondii40.2274.6785.27448forward
CNT30127375Eragrostis tefCorymbia citriodora46.9593.7385.47523forward
CNT30685098Eragrostis tefTriticum urartu46.8635.5190.8522forward
CNT30480841Eragrostis tefArabidopsis halleri35.6463.9387.15397forward
CNT30368495Eragrostis tefSorghum bicolor65.871.9390.04733forward
CNT30355521Eragrostis tefLactuca sativa61.0471.2886.03680forward
CNT30427598Eragrostis tefPapaver somniferum78.0163.5286.08869forward
CNT30706337Eragrostis tefPrunus avium75.1371.7885.07837forward
CNT3052982Eragrostis tefAmborella trichopoda30.5225.9986.47340forward
CNT3024428Eragrostis tefPopulus trichocarpa5783.2285.51635forward
CNT3037774Eragrostis tefCucumis melo41.9260.4186.94467forward
CNT30496962Eragrostis tefDigitaria exilis78.8278.1191.34878forward
CNT30594443Eragrostis tefEragrostis curvula95.5191.6594.831064forward
CNT30603788Eragrostis tefOryza punctata78.974.6292.72879forward
CNT30176122Eragrostis tefVigna angularis76.3975.1882.84851forward
CNT30113122Eragrostis tefFicus carica43.958.9285.48489forward
CNT30724026Eragrostis tefLupinus angustifolius75.6758.5486.36843forward
CNT3050294Eragrostis tefCucumis sativus42.9177.9885.98478forward

Expression of CNT30350898

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MGLVGIILTIPASPFFRNLGSFSSSLPDRLSILVWSSANLTAMCEVWQSSTGA*

Sequence

>CNT30350898
GGAAAAATAACATATCAGACAGCAGAGAACAAAACTTCACCACGGCACAAGCATAAACGGTAAACTGGACACCATTAAAGACCATAACAGGCGAATCAAA
GTTCAGTCTCATAGCATCCACTGCTCAAATAACACGACAGTATTTTAAGGACGGATAAAGTACGAAGAACTCGATGACACTAAACAAAACTTAAACAGGC
ACTACGACCCATAATAGGAGCCATCCATCAGACGCCTCATTTCTTCTTGGCAGCAGCCTTGGTAACCTTGGCACCGGTGGGGTCCTTCTTCTCCACGCTC
TTGATGACACCAACAGCAACAGTCTGCCTCATGTCCCGGACAGCAAACCGACCAAGAGGGGGGTACTGAGAGAAGGTCTCAACAACCATGGGCTTGGTGG
GAATCATCTTAACCATACCAGCATCACCGTTCTTCAGGAACTTGGGCTCCTTCTCCAGCTCCTTGCCAGATCGTCTGTCGATCTTGGTCTGGAGCTCAGC
AAACTTGACAGCAATGTGCGAGGTGTGGCAGTCCAGCACCGGGGCATAGCCGTTGCCGATCTGGCCAGGGTGGTTCATGATGATAACCTGGGAGGTGAAG
CTGGCCGCCTCCTTAGCAGGGTCATCCTTGGAGTTTGAGGCAACATAACCACGCTTGATATCCTTCACGGCAACATTCTTCACGTTGAAGCCCACATTGT
CACCAGGAAGAGCCTCCTGGAGAGCCTCGTGGTGCATCTCAACAGACTTGACCTCAGTTGTCAGGCCGCTGGGACCAAAGGTAACCACCATACCAGGCTT
GAGGACACCAGTCTCCACACGGCCCACAGGGACAGTTCCAATACCACCAATCTTGTACACATCCTGAAGGGGAAGACGCAGGGGCTTGTCTGAGGGCCTC
TTGGGCTCGTTGATCTGGTCAAGAGCCTCCAGCAGAGTGGGGCCCTTGTACCAGTCAAGGTTGGTGGACCTCTCAATCATGTTGTCACCCTCAAATCCAG
AGATGGGAACGAAGGGGATCTTGTCAGGGTTGTAGCCGACCTTCTTGAGGTACGAAGAGACCTCCTTCACAATCTCATCGTAACGGGCCTTGGAGTACTT
GGGAGTGGTGGCAT