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Detailed information on CNT30350897


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONBNAT001751, E-value = 4e-122

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30121467Eragrostis tefPhyscomitrium patens60.2669.0881.66458forward
CNT30588719Eragrostis tefMusa acuminata33.1659.1586.11252forward
CNT30540422Eragrostis tefBrassica napus66.5873.9885.77506forward

Expression of CNT30350897

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MGLVGIIFTIPASPFFRNLGSFSSSLPDRLSILVCSSANFTAMWEV*

>peptide 2 (56 aa)
MMMTWEVKLAASLAGSSLEFEATYPRLISFTATFFTLKPTLSPGRASWRASWCISTD

Sequence

>CNT30350897
TAAGCAAAAGGAGGAAAAATAACATATCAGACAGCAGAGAACAAAACTTCACCACGGCACAAGCATAAACGGTAAACTGGACACCATTAAAGACCATAAC
AGGCGAATCAAAGTTCAGTCTCATAGCATCCACTGCTCAAATAACACGACAGTATTTTAAGGACGGATAAAGTACGAAGAACTCGATGACACTAAACAAA
ACTTAAACAGGCACTACGACCCATAATAGGAGCCATCCATCAGACGCCTCATTTCTTCTTGGCAGCAGCCTTGGTAACCTTGGCACCGGTGGGGTCCTTC
TTCTCCACGCTCTTGATGACACCAACAGCAACAGTCTGCCTCATGTCCCGGACAGCAAACCGACCAAGAGGGGGGTACTGAGAGAAGGTCTCCACAACCA
TGGGCTTGGTGGGAATCATCTTCACCATACCAGCATCACCGTTCTTCAGGAACTTGGGCTCCTTCTCGAGCTCCTTGCCGGATCGTCTGTCAATCTTGGT
CTGCAGCTCAGCAAACTTCACGGCGATGTGGGAGGTGTGACAGTCCAGCACTGGGGCATAGCCGTTACCGATCTGTCCAGGGTGGTTCATGATGATGACC
TGGGAGGTGAAGCTGGCAGCCTCCTTGGCGGGGTCATCCTTGGAGTTTGAGGCCACATACCCACGCTTGATATCCTTCACAGCAACATTCTTTACGTTGA
AACCCACGTTGTCACCAGGAAGGGCCTCCTGGAGAGCCTCATGGTGCATCTCAACAGACT