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Detailed information on CNT30350895


BLAST search results

BLAST vs Swiss-Prot:
sp|O64937|EF1A_ORYSJ, E-value = 0.0

BLAST vs NONCODE:
NONCQUT008675, E-value = 1e-95

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30224132Eragrostis tefHordeum vulgare38.0962.6889.53430forward
CNT30234068Eragrostis tefBrassica oleracea40.7497.4686.74460forward
CNT30440628Eragrostis tefAegilops tauschii32.0649.3289.5362forward
CNT30598511Eragrostis tefFraxinus excelsior40.4870.286457forward
CNT30647369Eragrostis tefRosa chinensis37.246.3685.24420forward
CNT30101006Eragrostis tefOryza rufipogon35.4357.4793400forward

Expression of CNT30350895

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MGLVGIILTIPASPFFRNLGSFSSSLPDRLSILVWSSANLTAMCEVWQSSTGA*

Sequence

>CNT30350895
GGAAAAATAACATATCAGACAGCAGAGAACAAAACTTCACCACGGCACAAGCATAAACGGTAAACTGGACACCATTAAAGACCATAACAGGCGAATCAAA
GTTCAGTCTCATAGCATCCACTGCTCAAATAACACGACAGTATTTTAAGGACGGATAAAGTACGAAGAACTCGATGACACTAAACAAAACTTAAACAGGC
ACTACGACCCATAATAGGAGCCATCCATCAGACGCCTCATTTCTTCTTGGCAGCAGCCTTGGTAACCTTGGCACCGGTGGGGTCCTTCTTCTCCACGCTC
TTGATGACACCAACAGCAACAGTCTGCCTCATGTCCCGGACAGCAAACCGACCAAGAGGGGGGTACTGAGAGAAGGTCTCAACAACCATGGGCTTGGTGG
GAATCATCTTAACCATACCAGCATCACCGTTCTTCAGGAACTTGGGCTCCTTCTCCAGCTCCTTGCCAGATCGTCTGTCGATCTTGGTCTGGAGCTCAGC
AAACTTGACAGCAATGTGCGAGGTGTGGCAGTCCAGCACTGGGGCATAGCCGTTGCCGATCTGGCCAGGGTGGTTCATGATGATAACCTGGGAGGTGAAG
CTGGCCGCCTCCTTAGCAGGGTCATCCTTGGAGTTTGAGGCAACATAACCACGCTTGATATCCTTCACAGCAACATAACCACGCTTGATATCCTTCACAG
CAACATTCTTCACATTGAAGCCCACATTGTCACCAGGAAGAGCCTCCTGGAGAGCCTCGTGGTGCATCTCAACAGACTTGACCTCAGTTGTCAGGCCGCT
GGGACCAAAGGTAACCACCATACCAGGCTTGAGGACACCAGTCTCCACACGGCCCACAGGGACAGTTCCAATACCACCAATCTTGTACACATCCTGAAGG
GGAAGACGCAGGGGCTTGTCTGAGGGCCTCTTGGGCTCGTTGATCTGGTCAAGAGCCTCCAGCAGAGTGGGGCCCTTGTACCAGTCAAGGTTGGTGGACC
TCTCAATCATGTTGTCACCCTCAAATCCAGAGATGGGAACGAAGGGGATCTTGTCAGGGTTGTAGCCGACCTTCTTGAGGTACGAAGAGACCTCCTTCAC
AATCTCATCGTAACGGGCCTTGGAGTACT