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Detailed information on CNT30349705


BLAST search results

BLAST vs Swiss-Prot:
sp|P29402|CALX1_ARATH, E-value = 5e-86

BLAST vs NONCODE:
NONZMAT001268, E-value = 2e-139

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676366Eragrostis tefSetaria viridis31.3856.2791.36220forward
CNT30517641Eragrostis tefJuglans regia32.141.8281.33225forward
CNT30378008Eragrostis tefArabidopsis thaliana46.535.9880.06326forward
CNT30278532Eragrostis tefChenopodium quinoa39.6625.384.17278forward
CNT30728459Eragrostis tefCorchorus capsularis26.9630.4881.48189forward
CNT30629341Eragrostis tefVigna unguiculata38.3724.6381.78269forward
CNT30709122Eragrostis tefGlycine max23.9747.7380.95168forward
CNT30164689Eragrostis tefPistacia vera22.6828.9183.65159forward
CNT30190468Eragrostis tefSecale cereale62.245.0988.3436forward
CNT30397803Eragrostis tefTriticum turgidum60.0653.6388.36421forward
CNT30561418Eragrostis tefActinidia chinensis33.6723.4180.93236forward
CNT30238817Eragrostis tefBrassica oleracea45.2259.4779.81317forward
CNT30144554Eragrostis tefMedicago truncatula44.5136.4579.49312forward
CNT30264134Eragrostis tefBrassica rapa43.9435.5279.87308forward
CNT30605054Eragrostis tefGossypium raimondii29.135.9880.88204forward
CNT30686114Eragrostis tefTriticum urartu34.9540.9788.98245forward
CNT30365925Eragrostis tefSorghum bicolor43.0834.0191.06302forward
CNT30120413Eragrostis tefCitrus clementina24.3921.1485.38171forward
CNT3038556Eragrostis tefCucumis melo28.9625.780.79203forward
CNT30149228Eragrostis tefBrachypodium distachyon39.2357.8986.91275forward
CNT30101562Eragrostis tefOryza rufipogon43.5135.389.84305forward
CNT30585446Eragrostis tefEchinochloa crusgalli22.2551.6692.31156forward
CNT30116414Eragrostis tefOryza nivara25.5363.9388.27179forward
CNT30333676Eragrostis tefCynara cardunculus23.1131.481.48162forward
CNT30725707Eragrostis tefLupinus angustifolius23.429.7684.15164forward

Expression of CNT30349705

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MREFVIRYRRWGLEVMLNILSSLGVLVLKNEMHLV

Sequence

>CNT30349705
CTTGTAGTTGGGGTTGTCAATAAGTGGTGCATGCCACTTGCCCTTGTAAGCAGGGTTTGACTTCATTGGCTTCTTCCACTCACCACATCCAGGTGCCTCT
TCGCACTTGGGGTTGTCAATCTTAGGTGCTTCCCACTCGCCATCCTCCTCATCATCCCAGTCCTCAGGCTTAGCAGCCTCTGGATCATCAATCTCTTCAG
GCTCGTCATCTAACCATCCCTCTGGCTTGGTAGCTTCCTCGTCCACAATTTCCATTGGGGCATCCTCATCCCAGTCATCAGGCTTAGCAGCCTCTGGATC
ATCAATCTCTTCAGGCTCGTCATCTAACCATCCCTCTGGCTTGGTAGCTTCCTCGTCCACAATTTCCATTGGGGCATCCTCATCCCAGTCATCAGGCTTC
ACTGCATCAGGATCAGGGATTTTAGCTCTCTCGTCCCAGTCCTCAGGCTTCTTGTCATCAGGGTCAGGAATAGTCTTGGATGGGATAAGTGCTGGCTCAA
AATCATCAGCAGAAAGGAAGTTTCCTTCCTTCTTTTTCTCTCCATCAACCAATATGGTCACCTCATTATTTGGCTTCAAGATAGCCGTGTAAACATGAGA
GAGTTTGTCATACGGTACAGAAGGTGGGGACTTGAGGTGATGCTCAACATACTTTCCAGTCTTGGGGTTCTTGTGCTTAAGAATGAAATGCACCTTGTTT
G