Detailed information on CNT30349438


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523938Eragrostis tefSetaria italica21.7413.5488.5770reverse complement

Expression of CNT30349438

Peptides detected in this lncRNA

>peptide 1 (38 aa)
GSAPSSAVASPASSTVTCSSAPTSPSLTRTTHKRRRMR*

>peptide 2 (31 aa)
IGPLIGGGLAGLIYGDVFIGSYQPVADQDYA*

Sequence

>CNT30349438
GGATCGGCCCCCTCATCGGCGGTGGCCTCGCCGGCCTCATCTACGGTGACGTGTTCATCGGCTCCTACCAGCCCGTCGCTGACCAGGACTACGCATAAGC
GCCGGAGGATGAGATGAACCGGGTGCGCAACCCGCCGCTGGATTCGCGTCGTCGTCGTTTGCTTAATTTGCTCTTCACCACGTGACACACGGTCACGATT
GTTTGTACCAAAGATGTGTCGTGCATGGTCTTGTGTATCACTTTCCTTTCCTTTCCTTTTTGATTAAAAAACATCAATCAATGTAAAGATGCGTCGTATA
CTCTCGTTCGCAACTTTCGGTT