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Detailed information on CNT30348933


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675831Eragrostis tefSetaria viridis24.3416.9495.6592forward
CNT30523531Eragrostis tefSetaria italica24.3413.4195.6592forward
CNT30468162Eragrostis tefSaccharum spontaneum24.3412.5795.6592forward

Expression of CNT30348933

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MEMDGGGDGVFALFFGCSSQMRELAYDVVTIHLLNGLSRKPALQ*

Sequence

>CNT30348933
GCTTCTCTGAGGACGGCGCACAGTAGTAGTGGAAGAAGCGCATGAGGAGGCTGAAGAGGAAGCGCCAAAAGATGAGGCAGAGATCCAAGTAGGCTGATGG
AGATGGATGGTGGTGGTGATGGCGTGTTTGCACTTTTCTTCGGCTGTAGTAGTCAGATGAGAGAGCTGGCATATGACGTAGTCACCATTCATCTGTTGAA
TGGCTTATCTCGGAAACCTGCACTTCAGTAGGCCTGTTATCGATGTTCTAGTTATATCAAGAGTTTTGCACTAAGACAAATCAGTTGTCATGTGAACCTG
TTGTGGAGCTCTATTGGTGATAAGTTTGATCCTCCGTTGCTGTTTAATATCTTGGTCACTGTTGCTGGTGAAGTTCTA