CANTATAdb - search

Detailed information on CNT30348745

BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONTPRT002153, E-value = 1e-89

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30693916	Eragrostis tef	Oryza sativa	99.82	74.28	85.03	1109	forward
CNT30674319	Eragrostis tef	Setaria viridis	73.63	82.05	86.8	818	forward
CNT30641270	Eragrostis tef	Nymphaea colorata	99.82	55.53	81.51	1109	forward
CNT30191758	Eragrostis tef	Secale cereale	94.78	69.14	86.42	1053	forward
CNT30305252	Eragrostis tef	Triticum aestivum	76.6	99.65	85.55	851	forward
CNT30226205	Eragrostis tef	Hordeum vulgare	87.4	94.09	85.79	971	forward
CNT30553671	Eragrostis tef	Oryza glaberrima	80.74	77.13	85.17	897	forward
CNT30141342	Eragrostis tef	Lolium perenne	99.82	85.77	87.2	1109	forward
CNT307928	Eragrostis tef	Zea mays	78.85	73.49	85.39	876	forward
CNT30689811	Eragrostis tef	Triticum urartu	99.82	77.61	86.93	1109	forward
CNT30722465	Eragrostis tef	Triticum spelta	71.02	69.88	86.44	789	forward
CNT30596296	Eragrostis tef	Oryza meridionalis	99.91	80.61	84.95	1110	forward
CNT30370352	Eragrostis tef	Oryza glumipatula	81.19	76.18	84.59	902	forward
CNT30110940	Eragrostis tef	Oryza longistaminata	99.82	40.89	85.12	1109	forward
CNT30150301	Eragrostis tef	Brachypodium distachyon	58.51	46.03	87.69	650	forward
CNT30116770	Eragrostis tef	Oryza nivara	99.82	79.33	85.12	1109	forward

Expression of CNT30348745

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVIVLPVRVLTKICIPPLSLSTRWRVDSFWML*

>peptide 2 (56 aa)
LLLDVVVGEGAAVLELLAGEDEALLVRRDALLVLDLRLHVVDGVRRLNLQGNRLAC*

>peptide 3 (52 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSSVMVLPVKVLTKICMPPLSLSTR*

>peptide 4 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSDDSTSRVIVLPVKVFTKICMPPRRRSTRCRVDSFWIL*

Sequence

>CNT30348745
GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGT
CCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCAGACGACTCAACCTCCAGGGTAATCGTCTTGCCTGTTAAGGTCTTCACGAAAATCTGCATGCCACC
GCGCAGACGGAGTACAAGGTGCAGGGTGGATTCCTTCTGGATATTGTAGTCAGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGC
TGCTGGTCCGGTGGAATACCCTCCTTGTCCTGAATCTTTGCCTTCACATTATCAATTGTGTCGGACGACTCCACTACAAGTGTGATGGTCTTGCCGGTCA
GAGTCTTGACAAAGATTTGCATGCCTCCCCTCAGCCTCAGCACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGCCAACGTCCGACCATCCTC
GAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATCTTCGCCTTAACATTGTCAATTGTGTCTGAGGACTCA
ACCTCAAGTGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATTTGCATGCCTCCCCTAAGCCTCAGCACAAGGTGAAGGGTGGACTCTTTCTGAATGT
TGTAGTCAGCCAAGGTGCGACCGTCCTCGAGCTGCTTTCCAGCAAAGATGAGGCGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGATCTTCGCCTT
AACATTGTCAATCGTGTCCGAGGACTCAACTTCAAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATACCACCCCTGAGCCTGAGCACG
AGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGTGTCCTCCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGGA
TCCCCTCCTTGTCCTGGATTTTAGCCTTGACGTTGTCAATGGTATCCGAGGACTCAACCTCAAGGGTGATGGTCTTACCAGTGAGGGTCTTTACAAAGAT
CTGCATCTGAG