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Detailed information on CNT30347837

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMEST004927, E-value = 2e-22

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30678637	Eragrostis tef	Setaria viridis	49.68	94.33	97.91	383	forward
CNT30524663	Eragrostis tef	Setaria italica	58.37	77.32	98.44	450	reverse complement
CNT30641615	Eragrostis tef	Nymphaea colorata	57.98	80.69	89.71	447	reverse complement
CNT30549212	Eragrostis tef	Ipomoea triloba	83.92	21.45	90.42	647	reverse complement
CNT30513456	Eragrostis tef	Juglans regia	83.4	20.26	91.29	643	reverse complement
CNT30270599	Eragrostis tef	Chenopodium quinoa	71.73	33.97	90.42	553	reverse complement
CNT30730494	Eragrostis tef	Corchorus capsularis	83.4	73.07	90.82	643	reverse complement
CNT30630109	Eragrostis tef	Vigna unguiculata	79.51	19.45	90.7	613	reverse complement
CNT30196906	Eragrostis tef	Pisum sativum	43.06	43.86	96.39	332	reverse complement
CNT30294119	Eragrostis tef	Triticum aestivum	35.28	99.63	98.53	272	forward
CNT30220801	Eragrostis tef	Hordeum vulgare	47.6	94.59	98.37	367	reverse complement
CNT30396824	Eragrostis tef	Triticum turgidum	79.25	60.68	98.36	611	forward
CNT30569398	Eragrostis tef	Actinidia chinensis	83.27	32.86	91.59	642	reverse complement
CNT30511593	Eragrostis tef	Solanum lycopersicum	17.77	21.04	86.13	137	reverse complement
CNT30552690	Eragrostis tef	Oryza glaberrima	93	46.83	97.77	717	reverse complement
CNT30442196	Eragrostis tef	Aegilops tauschii	74.71	67.92	99.13	576	forward
CNT30257620	Eragrostis tef	Avena sativa	15.56	35.19	84.17	120	forward
CNT30657980	Eragrostis tef	Triticum dicoccoides	52.01	98.28	98.5	401	forward
CNT30460907	Eragrostis tef	Saccharum spontaneum	82.88	19.18	98.75	639	reverse complement
CNT3017993	Eragrostis tef	Zea mays	82.62	33.85	98.74	637	reverse complement
CNT30207763	Eragrostis tef	Helianthus annuus	72.11	59.98	92.81	556	reverse complement
CNT30689042	Eragrostis tef	Triticum urartu	83.14	22.24	98.91	641	reverse complement
CNT30720843	Eragrostis tef	Triticum spelta	27.76	99.53	98.6	214	reverse complement
CNT30363261	Eragrostis tef	Sorghum bicolor	72.5	43.91	97.32	559	reverse complement
CNT30620564	Eragrostis tef	Cajanus cajan	83.53	12.44	90.53	644	forward
CNT30596724	Eragrostis tef	Oryza meridionalis	69.78	22.24	97.4	538	forward
CNT30354697	Eragrostis tef	Lactuca sativa	32.56	35.55	96.81	251	reverse complement
CNT30481523	Eragrostis tef	Chara braunii	8.43	27.08	93.85	65	forward
CNT30410880	Eragrostis tef	Papaver somniferum	83.4	70.97	91.76	643	reverse complement
CNT30642274	Eragrostis tef	Cannabis sativa	48.25	45.53	91.4	372	forward
CNT30319706	Eragrostis tef	Asparagus officinalis	53.57	14.37	95.64	413	reverse complement
CNT3036965	Eragrostis tef	Cucumis melo	83.4	88.32	91.29	643	reverse complement
CNT30331560	Eragrostis tef	Dioscorea rotundata	22.83	34.85	94.89	176	reverse complement
CNT30148090	Eragrostis tef	Brachypodium distachyon	83.14	22.07	98.91	641	forward
CNT30104377	Eragrostis tef	Oryza rufipogon	98.96	59.33	96.85	763	forward
CNT30497700	Eragrostis tef	Digitaria exilis	39.95	56.31	97.4	308	forward
CNT30604015	Eragrostis tef	Oryza punctata	57.46	91.72	94.58	443	forward
CNT30174498	Eragrostis tef	Vigna angularis	44.88	68.51	89.31	346	reverse complement
CNT30551087	Eragrostis tef	Oryza brachyantha	41.37	107.05	91.54	319	forward
CNT30115272	Eragrostis tef	Eutrema salsugineum	17.77	28.19	86.13	137	reverse complement

Expression of CNT30347837

Peptides detected in this lncRNA

>peptide 1 (47 aa)
EKYWLVIVKPLFLTGRDTKGLCPPSLFIQEMEGQSFFFGFFIFSSKS*

>peptide 2 (37 aa)
MKIDGKCLINLIRSCGNKVQIVRSLGCLSCMHHCTST*

>peptide 3 (66 aa)
MGGEPVAVSAVTPEALGKSEERALILGWAYYLYAFSSYPLRTWLPSVYRRHDNWYTRGASFPVLSY*

>peptide 4 (89 aa)
EILASNCEAPILNWKGHQRTLPSLSIYPRDGRAELFFWFFHLFIKELNNEDRWQVPDQFDQVVWEQGSNRSFVRMPQLHASLHFHLTPI*

>peptide 5 (56 aa)
MLSAVILSALGYPAFTVGTITGTPEVRPSRSSRTRERSSQCSNAHTGYGPNCLTTF*

>peptide 6 (58 aa)
MDRTVSRRSEPSSRTALMGEQPNPWNHLQLQVAKSRHRGAKPSRRCGLLGKISLLSLE*

Sequence

>CNT30347837
GAGAAATATTGGCTAGTAATTGTGAAGCCCCTATTCTTAACTGGAAGGGACACCAAAGGACTCTGCCCTCCCTCTCTATTTATCCAAGAGATGGAAGGGC
AGAGCTTTTTTTTTGGTTTTTTCATCTTTTCATCAAAGAGTTGAATAATGAAGATAGATGGCAAGTGCCTGATCAATTTGATCAGGTCGTGTGGGAACAA
GGTTCAAATCGTTCGTTCGTTAGGATGCCTCAGCTGCATGCATCACTGCACTTCCACTTGACACCTATTTAAACGGCTCGTCTCGCCGCTACCTTATCCT
ATTTCCATACTTCTGTCGCTCCATCCCCGTATGGGTGGAGAACCCGTCGCTGTCTCGGCTGTGACACCGGAGGCTCTAGGGAAGTCGGAGGAGAGAGCAC
TCATCTTGGGGTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCGTTTACCGTAGGCACGATAACTGGTACACCAG
AGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAAC
CCAGCTCACGTACCGCATTAATGGGCGAACAGCCCAACCCTTGGAACCACCTACAGCTCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCTCG
TCGATGTGGACTCTTGGGGAAGATCAGCCTGTTATCCCTAGAGTAACTTTTATCCGTTGAGCGGTTGGGTT