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Detailed information on CNT30347744


BLAST search results

BLAST vs Swiss-Prot:
sp|P18123|CATA3_MAIZE, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692473Eragrostis tefOryza sativa36.7846.7283.85576forward
CNT30678563Eragrostis tefSetaria viridis10.1575.7186.16159forward
CNT30520085Eragrostis tefSetaria italica40.6836.8886.81637forward
CNT30616919Eragrostis tefSesamum indicum4.6622.689.0473forward
CNT30185311Eragrostis tefSecale cereale25.0327.8688.27392forward
CNT30304171Eragrostis tefTriticum aestivum19.9243.5187.18312forward
CNT30223811Eragrostis tefHordeum vulgare9.1366.8289.51143forward
CNT30243876Eragrostis tefAvena sativa24.250.3386.81379forward
CNT30663894Eragrostis tefTriticum dicoccoides21.6514.4185.84339forward
CNT30139766Eragrostis tefLolium perenne23.575.187.23368forward
CNT302263Eragrostis tefZea mays24.7834.7487.11388forward
CNT30228927Eragrostis tefAnanas comosus14.2494.0991.03223forward
CNT30369978Eragrostis tefOryza glumipatula33.3369.5184.87522forward
CNT30575497Eragrostis tefOryza barthii27.9134.8585.58437forward
CNT30116279Eragrostis tefOryza nivara20.3116.0283.65318forward

Expression of CNT30347744

Peptides detected in this lncRNA

>peptide 1 (61 aa)
RESAKRLTKRSCLSASHERYLSPGCLKSFCLRMVAFSLFPTTGRVGTGVGGACRSGACLEG*

Sequence

>CNT30347744
CAGGGAGTCGGCGAAGCGCCTGACGAAGCGCTCCTGCCTGTCGGCGTCCCATGAGCGGTACCTCTCCCCTGGCTGCTTGAAGTCGTTCTGCTTGCGGATG
GTGGCCTTCTCCCTCTTCCCCACCACGGGGCGTGTTGGCACGGGCGTCGGAGGTGCGTGTCGAAGCGGGGCGTGCCTGGAGGGGTAGTAGTCGACCTCCT
CGTCGCGGTGCATGAAGTTCATGGCGCCGTCGTAGTGGTTGTTGTGGTGCGTGTCGAAGCGGGGCGTGCCTGGAGGGGTAGTAGTCGACCTCCTCGTCGC
GGTGCATGAAGTTCATGGCGCCGTCGTAGTGGTTGTTGTGGTGCGCGCACTTGGGCGCGTTCACGGGCAGCATCAGGTAGTTGGGGCCCAGCCGGTAGCG
CTGCGTGTCGGCGTACGCGAACACCCGGCACTGCAGCATCTTGTCGTCCGAGTAGTAGATCCCCGGCACCAGCAGCCCCGGGCCGAACGCCAGCTGCTCG
TTCTCGTTGAAGAAGTTGTCCACGTTGCGGTCCAGCACCAGACGCCCCACGGGCTGCAGCGGGAGCAGGTCCTCCGGCCATGTCTTGGTGTCGTCCAGAG
GGTCGAAGTCGTACTGATCCTCCGTGTCAGGGTCCATCACCTGTTATCCCATTCACCCATTAATTGTTGATGATATCATCTATAGAAGTAGTAGGAATAT
CTCGAGACCAAGGAAGCTGCTGCTTATCTAATCTAGAGTAGAAAGAAATAAACAGCTAGCCAAAAAAAAAAAGACCAATCAAAATAACCAAAAGATCGAC
CTGGACGAAGAGCTTCCACTCCGGGAAGTTGCCCGCGGCGATGGAGTCGTAGAGGTCCTGCGTGGCGTGGCTGTGGTTGCGCCCTCCCACGAGCGCCGCC
TCTTCGTCCGTCAAGATGCAGCGCACCCCGCAGGTGGGCTTCCAGTGGAACTTGACGTAGTGGGCCTTGCCGGCGGCGTTGACGAAGGTGTATGTGTTGA
CGCCGAAGCCGTCCATGTGGCGGTAGTCGGTGGGCACGCCCACGTCGTCGAACAGGAAGAAGAAGGTGTGCAGGCTCTCCGGGTGGTGCGACAGAAAGTC
GAAGACGCGCCAGTACTCCTGCACGTGCGACCTCGGGTTGGGCTTGAAGGCGTGGATCACGTCGGGGAACTTGATGCCGTCGCGGATGAAGAAGACGGGG
AAGTTGTTGCCCAGCAGGTCCCAGTTGCCCTCGCGCGTGTAGAACTTGACGGCGAACCCGCGCGGGTCGCGGATCGTCTCGGGGCTCCCGCGCTCGTGGA
TCACCGTCGAGAAACGCACGATCACCGGCGTACGGACGCCGGGGGAACGCAAGAAGTCGGCGCACGTCAGCGCAGACACGTCGTGGGTGCACTCGAAGAA
GCCCTTGGCGGAGGCGCCGCGCGCGTGGACGACGCGCTCCGGGATGCGCTCCCGAGCAAAGTGCGCGATCTTCTCGATCAGGTGGTAGTCCTCCAGCAGG
ATGGGGCCCCGGGGGCCCACCGTCAGAGCCTCGTTGTCGTTCCACACCGGCGCGCCGGCGTTCGTC