Detailed information on CNT30346729


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596095Eragrostis tefOryza meridionalis16.9720.9787.556reverse complement

Expression of CNT30346729

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MAAQKLLCFAVLASFVISAAGSRSPAEMVAPLQGSMGSSYDCVYSIYVQTGSIWKAGTDSVIALTLG

>peptide 2 (58 aa)
RKSNSSDCSDSLYISPFVALFSSHRHRSQSSKCEAVWFLNCSPWRLRNCSASPSSPPS*

>peptide 3 (38 aa)
ENPTARTVLTRSIYHPSLPSSAHTVTDPKVQSARRFGS*

Sequence

>CNT30346729
CGAAAATCCAACAGCTCGGACTGTTCTGACTCGCTCTATATATCACCCTTCGTTGCCCTCTTCAGCTCACACCGTCACAGATCCCAAAGTTCAAAGTGCG
AGGCGGTTTGGTTCTTGAACTGTTCGCCATGGCGGCTCAGAAATTGCTCTGCTTCGCCGTCCTCGCCTCCTTCGTGATCTCGGCTGCCGGGTCCAGATCG
CCGGCGGAGATGGTGGCGCCGCTGCAGGGCTCGATGGGCTCGAGCTACGACTGCGTGTACTCGATCTACGTGCAGACCGGATCGATCTGGAAGGCCGGGA
CGGACTCCGTGATCGCGCTCACGCTCGGGG