Detailed information on CNT30345946


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6L376|PSBB_SACHY, E-value = 3e-65

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30485866Eragrostis tefOlea europaea49.154.0985.52145forward
CNT30283847Eragrostis tefTriticum aestivum93.5620.295.29276forward

Expression of CNT30345946

Peptides detected in this lncRNA

>peptide 1 (63 aa)
APIELHCYAYLFNAIFGFCSSKRNVCSHNSLFIYQNYRKCFKKSRHTTYKKLAPFFISKDGMS*

Sequence

>CNT30345946
GCCCCCATAGAACTCCACTGTTACGCCTACTTGTTCAACGCTATATTTGGATTCTGCTCTTCTAAAAGGAACGTCTGCTCTCACAATTCCCTCTTCATCT
ACCAAAACTACCGGAAATGTTTCAAAAAAAGTAGGCATACGACGTACAAAAAGCTCGCGCCCTTCTTTATCTCTAAAGACGGGATGTCCTAACCATCCAA
CAGCTATTCCATCCCCATTGTCCATTGAGCCTGCTCTGAATAATCCTCCCTTTGCCGGATTATTACCAATATAATCATAAAAAGCTAATTTTTCG