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Detailed information on CNT30345510


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 6e-133

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30395272Eragrostis tefTriticum turgidum70.0462.3391.51589forward
CNT30441148Eragrostis tefAegilops tauschii55.7751.8888.91469forward
CNT30582821Eragrostis tefEchinochloa crusgalli54.5849.1494.55459forward
CNT30117539Eragrostis tefOryza nivara70.0449.8789.3589forward

Expression of CNT30345510

Peptides detected in this lncRNA

>peptide 1 (74 aa)
FIESFIRPIQNMSTNTHYWYNLPSACSILQYSYTHRYNSTYEYVRRLRYTRHPSFTLLLTCRGRSWWRRTMRCC*

Sequence

>CNT30345510
ATTTATTGAGTCATTCATCAGGCCCATCCAGAACATGAGCACAAATACACACTACTGGTACAATCTCCCATCGGCGTGCTCCATTTTACAGTACTCGTAC
ACCCACAGGTACAATAGTACATACGAATACGTACGTCGACTACGGTACACACGACATCCCAGCTTCACCTTGCTGCTCACTTGCCGGGGACGAAGTTGGT
GGCGTAGGACCATGCGTTGTTGTTGACGGGGTCGGCGAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCGGCGAAGGCCTCCGGGTCGTCGGCGAGG
CCCAGCGGGTCGAAGCTGCCGCCTGGGTAGAGCGGGTCGACGACCTCGCCGAGCGGGCCGCCGGCGACGCGGTATCCCTCGACGGCGCCCATGAGCACGA
CCTGGCAGGCCCAGATGGCGAGGATGCTCTGCGCGTGGATCAGGCTCGGGTTGCCGAGGTAGTCCAGCCCGCCCTCGCTGAAGATCTGGGACCCGGCCTT
GAACCACACGGCCTCGCCGAACTTGACGCCGTTGCGGGCCAGCAGCTCGGGGAAGACGCAGCCCAGCGCGCCCAGCATGGCCCACCGGCAGTGGATCACC
TCCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGGTAGCTCGGGGGCTCGCCGGAGAAGGGGCCCAGGTACTTGACGCGGTCGGGGCCGTACCACGGGCTGC
CGGACGCCGCCACCTTGGGCTTGGCCGCGGTCTTGCGCATGGTGATGCGGGCCTCGCCGAAGGCGCCCACCTTGATGGGGGCAGCCATTGCTGATCGAGC
GTGAGCTGATGAGAGAGTGTGCTAGCTAGCTGTGCGATGAG