Detailed information on CNT30345072


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639585Eragrostis tefNymphaea colorata21.5842.0886.14101forward

Expression of CNT30345072

Peptides detected in this lncRNA

>peptide 1 (48 aa)
YMHDTIIDLPINGLAHCSIFQHIPTTRCLLPSHNTKYANKLLINTFIS*

>peptide 2 (98 aa)
MNSGSSTTLRRLITASVVSALLLRVLRRLQVLGPATPCLEAGVLESPGVGEGHMPRAGVLESPGVGEGHMPRVGALVHGVQVLGSLHLRLATRQELQVF

>peptide 3 (30 aa)
MALPTAPSFNTYLQLGAYYLATTPSTLTSY*

Sequence

>CNT30345072
CTTACATGCACGATACGATCATCGATCTCCCTATAAATGGCCTTGCCCACTGCTCCATCTTTCAACACATACCTACAACTAGGTGCCTATTACCTAGCCA
CAACACCAAGTACGCTAACAAGCTACTGATTAACACGTTCATAAGCTAAAGCTACCAAGCTTGGACGGCATGAATTCCGGTTCTTCCACCACCCTCCGGC
GGTTGATCACCGCCTCCGTGGTCAGCGCGCTGCTGCTGCGCGTCCTGCGCCGCCTTCAAGTTCTCGGGCCGGCCACCCCATGTCTTGAGGCAGGTGTTCT
GGAGAGCCCTGGCGTAGGAGAAGGACACATGCCACGGGCAGGTGTTCTGGAGAGCCCTGGCGTAGGAGAAGGACACATGCCACGGGTTGGCGCCCTGGTT
CATGGCGTTCAAGTTCTGGGTAGCCTCCACCTCAGACTGGCCACCAGACAGGAACTGCAGGTTTTTTT