Detailed information on CNT30345070


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30724556Eragrostis tefLupinus angustifolius28.8716.6281.1164forward

Expression of CNT30345070

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MMPGTAGGILLWRSLRVYSATCSGVALSLLSAPGVTMLGLRRMPSNMTLFSAM*

>peptide 2 (44 aa)
MAFKFWVASTSDWPPDRNCRFFFKSQVRTWFAFFLAKCTRGDRN*

>peptide 3 (58 aa)
TMMPGTAGGILLWRSLRVYSATCSGLALARSSSASCAAFKFSGRPPHVLRQVFWRALA*

>peptide 4 (94 aa)
DHDARDSRGDPSVEELEGVLSHLLRVGLGAQQQRVLRRLQVLGPATPCLEAGVLESPGVGEGHMPRVGALVHGVQVLGSLHLRLATRQELQVFF*

Sequence

>CNT30345070
GACCATGATGCCAGGGACAGCCGGGGGGATCCTTCTGTGGAGGAGCTTGAGGGTGTACTCAGCCACTTGCTCAGGGTTGGCCTTGGCGCGCAGCAGCAGC
GCGTCCTGCGCCGCCTTCAAGTTCTCGGGCCGGCCACCCCATGTCTTGAGGCAGGTGTTCTGGAGAGCCCTGGCGTAGGAGAAGGACACATGCCACGGGT
TGGCGCCCTGGTTCATGGCGTTCAAGTTCTGGGTAGCCTCCACCTCAGACTGGCCACCAGACAGGAACTGCAGGTTTTTTTTTAAATCACAGGTCAGAAC
ATGGTTTGCATTTTTCTTGGCCAAATGTACAAGAGGAGATAGAAACTGACCATGATGCCAGGGACAGCCGGGGGGATCCTTCTGTGGAGGAGCTTGAGGG
TGTACTCAGCCACTTGCTCAGGGGTAGCCTTGTCCTTGCTCTCGGCACCAGGGGTGACCATGCTGGGCTTGAGGAGGATGCCCTCAAACATGACGTTGTT
CTCAGCCATGTAGTAGAAGGTCTCGGCCCAGACCTTCTGCGCAACCTCGAAGGTTCTCTCAATGCCGT