Detailed information on CNT30345065


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40677|ALFP_ORYSJ, E-value = 3e-51

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30314796Eragrostis tefCorylus avellana50.9236.2482.33249forward
CNT30518741Eragrostis tefJuglans regia49.2848.5982.99241forward
CNT30710704Eragrostis tefGlycine max45.428.5380.18222forward
CNT30139084Eragrostis tefLolium perenne48.2628.1686.86236forward
CNT30597047Eragrostis tefOryza meridionalis20.8610.4988.24102forward

Expression of CNT30345065

Peptides detected in this lncRNA

>peptide 1 (90 aa)
MPCSPDSRGDPSVEELEGVLSHLLRGSLVLALGTRGDHAGLEEDALKHDVVLSHVVEGLGPDLLRNLEGSLNAVLTVQQDFRLNNWHQTVV

>peptide 2 (87 aa)
DHDARDSRGDPSVEELEGVLSHLLRGSLVLALGTRGDHAGLEEDALKHDVVLSHVVEGLGPDLLRNLEGSLNAVLTGQPGGSFCGGA*

>peptide 3 (54 aa)
TMMPGTAGGILLWRSLRVYSATCSGVALSLLSAPGVTMLGLRRMPSNMTLFSAM*

Sequence

>CNT30345065
GACCATGATGCCAGGGACAGCCGGGGGGATCCTTCTGTGGAGGAGCTTGAGGGTGTACTCAGCCACTTGCTCAGGGGTAGCCTTGTCCTTGCTCTCGGCA
CCAGGGGTGACCATGCTGGGCTTGAGGAGGATGCCCTCAAACATGACGTTGTTCTCAGCCATGTAGTAGAAGGTCTCGGCCCAGACCTTCTGCGCAACCT
CGAAGGTTCTCTCAATGCCGTGCTCACCGGACAGCCGGGGGGATCCTTCTGTGGAGGAGCTTGAGGGTGTACTCAGCCACTTGCTCAGGGGTAGCCTTGT
CCTTGCTCTCGGCACCAGGGGTGACCATGCTGGGCTTGAGGAGGATGCCCTCAAACATGACGTTGTTCTCAGCCATGTAGTAGAAGGTCTCGGCCCAGAC
CTTCTGCGCAACCTCGAAGGTTCTCTCAATGCCGTGCTCACCGTCCAGCAGGATTTCAGGCTCAACAATTGGCACCAGACCGTTGTCCT