Detailed information on CNT30344884


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696959Eragrostis tefOryza sativa54.3554.3589.6125forward
CNT30297575Eragrostis tefTriticum aestivum50.8750.6585.47117forward
CNT30223808Eragrostis tefHordeum vulgare21.39.6889.849forward
CNT307240Eragrostis tefZea mays55.2231.5985.83127forward
CNT30721254Eragrostis tefTriticum spelta50.8721.0185.47117forward
CNT30117797Eragrostis tefOryza nivara56.0919.5589.92129forward
CNT30551757Eragrostis tefOryza brachyantha24.3518.7391.0756forward

Expression of CNT30344884

Peptides detected in this lncRNA

>peptide 1 (56 aa)
IPLGELVADVRARGGSRGGLLAEEGDNLLRPRGRCRCGIAGRAGEVQPGAEDLGRG*

>peptide 2 (39 aa)
PYHLASSSLMSGPEEVAAAGFLPKRETIFCAPAVGAAVA*

Sequence

>CNT30344884
CCATACCACTTGGCGAGCTCGTCGCTGATGTCCGGGCCCGAGGAGGTAGCCGCGGCGGGCTTCTTGCCGAAGAGGGAGACAATCTTCTGCGCCCCCGCGG
TCGGTGCCGCTGTGGCATAGCGGGAAGAGCCGGCGAAGTTCAGCCGGGTGCCGAGGATCTTGGACGGGGCTAGCGCTGCCATTGCCGCAGATGTTGAGCA
GGAAGCGGTTCAGCAGGGAGTGGGAGGCTG