Detailed information on CNT30344816


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533721Eragrostis tefEucalyptus grandis22.1213.4786.1794forward
CNT30292590Eragrostis tefTriticum aestivum37.6556.1490.62160forward
CNT30222490Eragrostis tefHordeum vulgare32.2429.1593.43137forward
CNT30564216Eragrostis tefActinidia chinensis1630.4988.2468forward
CNT30555733Eragrostis tefOryza glaberrima23.537.0397100forward
CNT30129085Eragrostis tefCorymbia citriodora22.128.9386.1794forward
CNT30683149Eragrostis tefTriticum urartu36.4734.9990.97155forward
CNT30319122Eragrostis tefAsparagus officinalis288.0585.71119forward

Expression of CNT30344816

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MVTSPMAPRAPAWPCTGVLRSGPVRAKGPTRR*

Sequence

>CNT30344816
TGTCGCTCCGTTAAGAAATTGACCAATCATTTCCAAAGTATATAACACATTTTGTCCCCGTCCAAATAAGAAATTAGCACTTTCGAGTTACAACCGTATC
CATCCGCAGCACAAATTCATTTATACAATCGTTCAAACAGCCACCACATCACCTAAGACCCATGGATGCATCCTACACAAGGACACATGCATATGTCTAC
TTGAAGTAGTAGGGGAGGTCGAGCACATAGAGGAGGAAGTAGGCAGACGCTGAGGATGGTGACGAGCCCAATGGCGCCCAGGGCGCCGGCCTGGCCGTGC
ACCGGCGTGTTGCGGAGCGGGCCGGTGAGGGCGAAGGGGCCCACGAGGAGGTAGCCGTGGGCGAGGCCGACCTCGATGCCACGGAGGAGCGGGCTCACGG
CGGTGCGGTAGGCCGGGAGGTTGGA