Detailed information on CNT30344815


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673197Eragrostis tefSetaria viridis49.7740.6193.93214forward
CNT30294278Eragrostis tefTriticum aestivum56.9856.8486.12245forward
CNT30222663Eragrostis tefHordeum vulgare52.7944.8688.99227forward
CNT304588Eragrostis tefZea mays54.8818.2988.14236forward

Expression of CNT30344815

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MAPETPPKKNPPVNLAQPSAVWSLSASFLRPVSVSVGAADLDATEERAHGGAVGREVG

Sequence

>CNT30344815
CATTGAATTGTCGCTCCGTTAAGAAATTGACCAATCATTTCCAAAGTATATAACACATTTTGTCCCCGTCCAAATAAGAAATTAGCACTTTCGAGTTACA
ACCGTATCCATCCGCAGCACAAATTCATTTATACAATCGTTCAAACAGCCACCACATCACCTAAGACCCATGGATGCATCCTACACAAGGACACATGCAT
ATGTCTACTTGAAGTAGTAGGGGAGGTCGAGCACATAGAGGAGGAAGTAGGCCCAGATGGCGCCGGAGACGCCGCCGAAGAAGAACCCTCCGGTGAACTT
GGCCCAGCCGTCGGCGGTCTGGAGCTTGTCGGCCTCCTTCTTGCGGCCAGTGAGCGTCAGCGTGGGCGCCGCCGACCTCGATGCCACGGAGGAGCGGGCT
CACGGCGGTGCGGTAGGCCGGGAGGTTGGA