Detailed information on CNT30344814


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677660Eragrostis tefSetaria viridis45.7340.7286.26182forward
CNT30522342Eragrostis tefSetaria italica34.1723.1389.71136forward
CNT30517711Eragrostis tefJuglans regia30.6523.0281.15122forward
CNT30618174Eragrostis tefSesamum indicum28.8926.6286.09115forward
CNT3021397Eragrostis tefCitrullus lanatus30.418.2881.82121forward
CNT30709049Eragrostis tefGlycine max28.3916.3183.19113forward
CNT30439237Eragrostis tefAegilops tauschii15.0821.2886.6760forward
CNT30446069Eragrostis tefSaccharum spontaneum54.529.5786.18217forward
CNT3016707Eragrostis tefZea mays54.5236.1787.56217forward
CNT30624589Eragrostis tefDaucus carota23.1218.5584.7892forward
CNT30361568Eragrostis tefSorghum bicolor54.5231.487.56217forward

Expression of CNT30344814

Peptides detected in this lncRNA

>peptide 1 (65 aa)
PSVSEMRGSRGVRVRLRHWRMKWSAPHWLLGVVVARVVAVHSQVKCNDKLGKKQQIPQIHARLVD*

Sequence

>CNT30344814
CCCGTCCGTCTCCGAGATGAGAGGTAGCCGCGGAGTGCGAGTGCGCCTACGCCATTGGAGGATGAAGTGGTCCGCGCCGCATTGGCTGTTGGGCGTGGTC
GTCGCCCGCGTCGTCGCCGTTCACTCGCAGGTTAAATGCAATGACAAATTGGGAAAGAAACAGCAGATACCACAAATCCATGCACGCCTTGTTGACTGAA
ACCAAAGGGCAATAGCCATGCATCCAGATCACAGAACTTAATACTCAGCCTCCTCATCGTCCTCTTCAACATCAGCTCCGACTTCCTCATAGTCCCTCTC
CAGTGCAGCCAGGTCCTCCCTCGCTTCTGAGAACTCCCCTTCTTCCATCCCTTCACCAACATACCAATGGACGAATGCACGCTTTGCATACATCAGAT