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Detailed information on CNT30344813


BLAST search results

BLAST vs Swiss-Prot:
sp|P23993|PSAL_HORVU, E-value = 7e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673014Eragrostis tefSetaria viridis51.6348.7494.07270forward
CNT30520920Eragrostis tefSetaria italica51.6338.9694.07270forward
CNT30516978Eragrostis tefJuglans regia27.1520.8283.1142forward
CNT30698134Eragrostis tefQuercus lobata27.727.7882.76145forward
CNT3021623Eragrostis tefCitrullus lanatus21.418.2584.82112forward
CNT30730016Eragrostis tefCorchorus capsularis21.4116.9281.25112forward
CNT30629841Eragrostis tefVigna unguiculata22.9420.5184.17120forward
CNT30712288Eragrostis tefGlycine max27.1524.6183.1142forward
CNT3042792Eragrostis tefPrunus dulcis28.1139.8482.31147forward
CNT30182270Eragrostis tefSecale cereale29.4527.989.61154forward
CNT30292897Eragrostis tefTriticum aestivum51.4345.6788.1269forward
CNT30390478Eragrostis tefTriticum turgidum51.4322.5788.1269forward
CNT30560479Eragrostis tefActinidia chinensis21.0310.4583.64110forward
CNT3084834Eragrostis tefVigna radiata20.4627.7985.05107forward
CNT30454500Eragrostis tefSaccharum spontaneum38.0554.9790.95199forward
CNT30135064Eragrostis tefLolium perenne51.4347.1191.08269forward
CNT3014188Eragrostis tefZea mays51.4335.2191.45269forward
CNT30720963Eragrostis tefTriticum spelta51.4348.2988.1269forward
CNT30620323Eragrostis tefCajanus cajan41.8712.2681.28219forward
CNT30483616Eragrostis tefChara braunii24.0931.582.54126forward
CNT30644515Eragrostis tefCannabis sativa21.9919.982.61115forward
CNT30104607Eragrostis tefOryza rufipogon20.6530.0892.59108forward
CNT30578384Eragrostis tefOryza barthii26.5835.4694.24139forward
CNT30582394Eragrostis tefEchinochloa crusgalli34.0347.7292.13178forward
CNT30604850Eragrostis tefOryza punctata29.2515.7694.77153forward
CNT30557050Eragrostis tefPanicum hallii32.3144.4792.9169forward
CNT30551896Eragrostis tefOryza brachyantha51.2440.4293.28268forward
CNT30112090Eragrostis tefFicus carica24.286.285.83127forward
CNT3040359Eragrostis tefMarchantia polymorpha20.4614.2984.11107forward

Expression of CNT30344813

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MAPETPPKKNPPVNLAQPSAVWSLSASFLRPVSVSVGAVDGAPSLKEATPYMVRQTLRMVTSPMAPRAPAWPPTSMPRRSGLTAVR*

Sequence

>CNT30344813
TGTCGCTCCGTTAAGAAATTGACCAATCATTTCCAAAGTATATAACACATTTTGTCCCCGTCCAAATAAGAAATTAGCACTTTCGAGTTACAACCGTATC
CATCCGCAGCACAAATTCATTTATACAATCGTTCAAACAGCCACCACATCACCTAAGACCCATGGATGCATCCTACACAAGGACACATGCATATGTCTAC
TTGAAGTAGTAGGGGAGGTCGAGCACATAGAGGAGGAAGTAGGCCCAGATGGCGCCGGAGACGCCGCCGAAGAAGAACCCTCCGGTGAACTTGGCCCAGC
CGTCGGCGGTCTGGAGCTTGTCGGCCTCCTTCTTGCGGCCAGTGAGCGTCAGCGTGGGCGCCGTGGACGGCGCGCCCTCGTTGAAGGAGGCGACGCCGTA
CATGGTGAGGCAGACGCTGAGGATGGTGACGAGCCCAATGGCGCCCAGGGCGCCGGCCTGGCCGCCGACCTCGATGCCACGGAGGAGCGGGCTCACGGCG
GTGCGGTAGGCCGGGAGGTTGGA