Detailed information on CNT30344811


BLAST search results

BLAST vs Swiss-Prot:
sp|P23993|PSAL_HORVU, E-value = 4e-67

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672548Eragrostis tefSetaria viridis65.357.7594.52365forward
CNT30438727Eragrostis tefAegilops tauschii32.9258.2392.93184forward
CNT30249690Eragrostis tefAvena sativa65.359.7491.78365forward
CNT30662078Eragrostis tefTriticum dicoccoides33.2764.1490.86186forward
CNT30582414Eragrostis tefEchinochloa crusgalli65.361.6687.95365forward
CNT30556995Eragrostis tefPanicum hallii37.0329.4595.65207forward

Expression of CNT30344811

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MAPETPPKKNPPVNLAQPSAVWSLSASFLRPVSVSEATPYMVRQTLRMVTSPMAPRAPAWPCTGVLRSGPVRAKGPTRR*

Sequence

>CNT30344811
TGTCGCTCCGTTAAGAAATTGACCAATCATTTCCAAAGTATATAACACATTTTGTCCCCGTCCAAATAAGAAATTAGCACTTTCGAGTTACAACCGTATC
CATCCGCAGCACAAATTCATTTATACAATCGTTCAAACAGCCACCACATCACCTAAGACCCATGGATGCATCCTACACAAGGACACATGCATATGTCTAC
TTGAAGTAGTAGGGGAGGTCGAGCACATAGAGGAGGAAGTAGGCCCAGATGGCGCCGGAGACGCCGCCGAAGAAGAACCCTCCGGTGAACTTGGCCCAGC
CGTCGGCGGTCTGGAGCTTGTCGGCCTCCTTCTTGCGGCCAGTGAGCGTCAGCGAGGCGACGCCGTACATGGTGAGGCAGACGCTGAGGATGGTGACGAG
CCCAATGGCGCCCAGGGCGCCGGCCTGGCCGTGCACCGGCGTGTTGCGGAGCGGGCCGGTGAGGGCGAAGGGGCCCACGAGGAGGTAGCCGTGGGCGAGG
CCGACCTCGATGCCACGGAGGAGCGGGCTCACGGCGGTGCGGTAGGCCGGGAGGTTGGA