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Detailed information on CNT30344621

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30184327	Eragrostis tef	Secale cereale	5.2	23.94	90.2	51	forward

Expression of CNT30344621

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MDTGYSLHGATFNFLISLIITPAGPPKYKSI*

>peptide 2 (35 aa)
MVAGPGLVTLECTQLHVRIRTRMHPTRLLLNEPPL*

>peptide 3 (36 aa)
QQLPARHKDMMIPVMFLQVMQLLPQASCLPLPKLVR*

>peptide 4 (38 aa)
PTTACTTQGHDDTCDVLASYAVAASSFLPPFAKASEIK*

>peptide 5 (43 aa)
MSFATELKTITVDACLAESADMGRVLLRDLVAPNTSWSLDQDS*

Sequence

>CNT30344621
CCAACAACTGCCTGCACGACACAAGGACATGATGATACCTGTGATGTTCTTGCAAGTTATGCAGTTGCTGCCTCAAGCTTCCTGCCTCCCTTTGCCAAAG
CTAGTGAGATAAAATGATTTCAGTTAGCATAGATGGACTTTGAGGTCATAATTTCTATATTTCAGCATACAGAATCAAGAGATAAAAATACAGCATGCAA
TCAAATACCATAAGCTAAGACTATTTTAAAAAAAAGATATATGATACCATTTTGTGAGTTAGCATATCATATTAAGATATTTTTCGGTGTGGAGATGCAT
AACATTCAAGACTAATTAAGTACATGGATACTGGTTACTCCTTACATGGTGCCACATTCAATTTCTTGATATCGTTAATTATTACTCCCGCTGGTCCCCC
CAAATACAAGTCCATTTAGCTTGAAATACTTGTTTACTTAACTAAATAGTTACCGTTCAGTATAACTTGATTTGAATATTCATTATCCCTTTAAACATAT
TGGATTTACTCCATTTTTTTAACCTGAACTTTAGTTCACTTTGATATTCTTCTCCTGTTATATATAGAAGGCTTAATTGCAAATTCCACCCCATATCTCA
ACCTTAGTTTGAGATTCTCTCCCATAAGTCTGTTTGTGGCAAAAACCACCCACCCCACCCCAACACAGGCTTAAATAGCACCTCGACCCTCATGAGCTTT
GCAACTGAGCTAAAAACCATCACTGTGGACGCGTGCCTAGCTGAGTCAGCTGATATGGGCCGTGTCCTGCTTCGTGACCTGGTCGCACCCAACACATCAT
GGTCGCTGGACCAGGACTCGTAACTCTCGAGTGCACCCAACTGCATGTCCGCATCCGAACCAGAATGCACCCAACTAGACTACTATTGAATGAACCGCCA
TTGTGATACACAGGTCCGAGTGACAATTCCTTCATGATTTTTGTTCCCACCGTACAGACATGCGCACACACACAAACGGGT