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Detailed information on CNT30344501


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30364526Eragrostis tefSorghum bicolor12.4323.987.16109forward

Expression of CNT30344501

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MPRRHRRPRVASVSARRRQKAGKGRELGSGAEAKAGPA*

Sequence

>CNT30344501
TGAGAATTCGATCAATTTAAGATCATCGGCATGAAGTTCAGGCAACCACAGAGATTTATACCTAAATTGACCACATATATATCACAACTGAACTGAACGA
TACAAACTTCTTACATAGGAACTTTACCACTACATAACTTAGCTCATAAGTCATGTATAAGACCACATCTACCACGCAAATCTGACCCACAGCGAACACT
GATTATTCCGACGATTCTACTCTGAGAAATCATACGAGCTCAGGCCATCTCCTACCAGATTACCTACACCAAACAAACTAACCTCCACACTAATTAGATC
AACTCATGAACCAACACCAACCTAATACCAAACACTTAACCACCCAACTCTTTACTCATAATTATTCTACCTAATGACGCAGAAGCGTCGCTGAAGGGAA
CCGAACCAGCAAGCATCCTGTGAACCTAACCACCACCAAATCCAACATCCGGTTGCTTGTTCATCAACCCTTCCTCTGAAAAAATACCGGAAGAGGTTGA
TCGGAACAGCTACCGGCAGATCTGATCCGGAGAAGCTCTCAATCGGATCCAACCGCGCCCATCAGGCGCTAACCATCCATCGATCCATCTACACATCTAG
CCATCCATCCATCAGAAGTGAACCACCAGAGACGAGAAGAGACGAAGCAGAAGGTGACTTTGAGAGGAGCGGACGCTGGTCCGGCGACGGCCTGTAGGGG
CCGTCAGGCGACCTGGCCGATGCCGAGGAGGCACCGCAGGCCGCGGGTTGCCTCGGTCTCCGCGCGGCGGAGGCAGAAGGCCGGGAAGGGGAGGGAGCTC
GGCTCGGGCGCGGAGGCGAAAGCCGGCCCGGCGTAGACGGCCACGTCGGCGGCCGCCACGACCTTTTTCGGCACCAA