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Detailed information on CNT30344011


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709030Eragrostis tefGlycine max14.5349.8982.88222forward
CNT30301323Eragrostis tefTriticum aestivum9.4929.2396.55145forward
CNT30650814Eragrostis tefRosa chinensis4.9726.392.1176forward
CNT30364601Eragrostis tefSorghum bicolor7.2640.8192.79111forward
CNT30149972Eragrostis tefBrachypodium distachyon6.7426.2894.17103forward
CNT30575210Eragrostis tefOryza barthii10.821.7192.73165forward
CNT30115465Eragrostis tefOryza nivara16.324.2290.36249forward
CNT30592968Eragrostis tefEragrostis curvula31.2866.288.28478forward

Expression of CNT30344011

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MGDWGSDARACAMCLGPSGDFAFSEGSGEEGGGSV

>peptide 2 (38 aa)
MWPLERVNRPVEKQRDHRSRSVVALLHLLDALLQGCRA*

>peptide 3 (37 aa)
MRSALRCDFMMDFWWRRCSEGVQACSSLQVGRVSYFQ*

>peptide 4 (45 aa)
MLNTGLTNWNKLLPPRSSLIHLVHCQYQNHSMASSYFIHKRSSVT*

>peptide 5 (49 aa)
MSMSRNRQKGTTDSIGFSAFRTTVIMPRRRPSRPGSVSSSSMIASAPAA*

Sequence

>CNT30344011
ACTATCTCTGATAACATAGTCACCAGATTTTTCAATCTATCTCTGAACCAGAGAGCCAACTTGTACAATTCCACGAGCAAATATTGAAAAATGTGAAATC
CATGACCATGATTATGATTAATAAAGATAAAAACTAGTAAAAATTAGCATTTCCAAGTACATTTTTCAAAGAACATTGTTCCAGCCCCTTGCATTACCTG
TTTGTTTATCAATTACATTTTTAACAGACCCAATCAGTATCTTCGGTCAAATTGGGATGCAAACATGGAATGGAAAAGGCTAGTACAGCATAGCCACGCA
CTACAGCAGCTGATGTGGAAGGCATGAATTCCAAGGAACAATCAAGCAATTTTTAACCAATATCAGAATTCAGAAACGTTGAAGAACAAACATAATGAAA
CTAAGGATGGATTGAAGTTATCCACAGTTCCACCTAAATTTCCAGTCTGATCAAAGGGAACGGGTGTCATGCTCAATACTGGATTAACTAACTGGAACAA
GCTACTACCACCCAGATCATCACTAATTCATCTTGTTCATTGTCAATATCAAAACCATAGCATGGCAAGTTCCTACTTCATACACAAAAGGAGCTCAGTC
ACATGATGTAAGTTGATAACAGAGCACCTGGTCACAAAATTTGTTATTCTGAGCCAGTAAATTATGAAACACATGAACAATGATCCAAAGAACCTTCTGA
GGCACCACCATTTCCAATAACATTTTACCAGGAGCACGGCTCTAACTTTTTATCTCATAGAGGTGGATAATTTACTCAGATTAGATCTGAAGCAGATACT
ACCACCAAGTTCTCATGTTCCGATCGAAATCTCAAACATCCACACTACAAACAGAAAGAAAGAAAAAAGGTAGCCACAGACAGGCATGAAAACATGTGGC
CTCTAGAGAGGGTAAACAGACCAGTAGAAAAACAACGAGACCACCGGAGCAGATCAGTCGTCGCGCTTCTTCATCTTCTCGACGCGCTGCTGCAGGGGTG
TCGAGCTTGACGACGAGGTGGGTGACGGAGAAGAGGATCCAGTAGAGGAGCAGGGCGGCGGCGATGAGGAGCGCGTTGCGCTGCGACTTCATGATGGACT
TCTGGTGGCGGAGGTGCTCGGAGGGGGTGCAGGCGTGCTCGTCGCTGCAGGTGGGCCGCGTCTCGTACTTCCAGTAGATGTCCATGAGCAGGAACAGGCA
GAAGGGCACCACCGACAGCATCGGCTTCAGCGCGTTCCGCACCACGGTAATCATGCCGCGGCGGAGGCCGTCGAGGCCGGGCAGCGTCAGCAGCAGCAGC
ATGATCGCCTCCGCGCCCGCCGCGTAGCCGAGGACCACCCACTCGAGCGCCATCGCCGCCGGTCCGAGCCTTGGATTTCGAAGATTTCGATCTGGGTTGG
GTTGAGAGAGGGGTTTGGGAGATGGGAGATTGGGGATCGGATGCGCGAGCGTGTGCGATGTGTTTGGGCCCTTCGGGGGATTTTGCCTTTAGCGAGGGGA
GCGGAGAGGAGGGCGGTGGATCGGTGAG