Detailed information on CNT30342903


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30134753Eragrostis tefLolium perenne17.5178.3389.31159forward
CNT30369442Eragrostis tefOryza glumipatula23.4620.2984.04213forward
CNT30106351Eragrostis tefOryza longistaminata23.4651.8284.51213forward

Expression of CNT30342903

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLPLCPSYFHLMKTGFWLPSKMTGITAYSCP*

>peptide 2 (72 aa)
MREARCSRNSEQICSFVLISDTHNHSDGQECSMVRYQETLENYGTAVKVLLRSFDAPWTKSVCWNFGGAGPG*

>peptide 3 (79 aa)
MRFSREEFVGSAFIAFGITLFVGFFYAAIVSKLLPPYENRLLAAIQNDWYYCLLLPLTLPVIIVAVYLHWLSMKMFKHA*

>peptide 4 (47 aa)
RYQIDFVSFKHVASHCISFHRCLFIRCLLNQSNDRYFSHTNQRGMNM*

>peptide 5 (55 aa)
MLFYRTVRALVVIPKSVSFGGISQRSFRAKNQISPILKRAWRTRSDLERNALLVW*

Sequence

>CNT30342903
CGATATCAGATTGATTTCGTGTCCTTCAAACATGTAGCTAGTCACTGTATATCATTCCACAGGTGCTTGTTTATTCGATGCCTCCTAAATCAGTCGAATG
ACAGGTATTTTAGTCACACTAACCAGCGAGGGATGAACATGTAACATAATGTTATTTTACAGAACGGTGAGAGCTTTGGTGGTGATTCCCAAATCCGTTT
CTTTTGGTGGGATATCCCAAAGATCTTTTCGTGCTAAGAACCAAATTTCGCCTATTCTTAAAAGAGCGTGGCGCACAAGATCGGACTTGGAACGCAATGC
ACTGTTGGTCTGGTGATGCATTCATCCAAAAATGTGTGATCTGAATCACTGAAGCCTCAACTGATTTCCCAAGGAAGGACTACTCATCTGAAGCCAAGGT
ATTGACCTGAAGATGCGTTTCTCTAGAGAAGAGTTTGTGGGATCGGCGTTCATTGCATTCGGCATCACATTGTTCGTGGGTTTCTTTTATGCTGCCATTG
TGTCCAAGCTACTTCCACCTTATGAAAACCGGCTTCTGGCTGCCATCCAAAATGACTGGTATTACTGCTTACTCTTGCCCTTGACACTTCCTGTGATAAT
TGTGGCAGTCTATCTGCATTGGTTGAGCATGAAGATGTTCAAGCATGCGTGAAGCAAGATGTTCACGAAATTCTGAGCAAATATGCAGTTTTGTTCTGAT
TTCAGATACTCATAATCACAGTGATGGTCAAGAATGCAGTATGGTCAGATATCAGGAGACACTGGAGAATTATGGCACCGCTGTTAAAGTACTACTGAGA
AGTTTTGACGCCCCCTGGACCAAATCAGTGTGCTGGAATTTTGGTGGTGCTGGGCCTGGATAACTACTGAGCTGCAAGCTTGAATGCCACCTACCTTGTA
GTTTCTCT