Detailed information on CNT30342892


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30390510Eragrostis tefTriticum turgidum21.413.2783.65104forward

Expression of CNT30342892

Peptides detected in this lncRNA

>peptide 1 (52 aa)
HMNNCLQRAASLLQPPPQARTSWLLPSPCAAPRPSNRGRTRSDLERNALLVW*

>peptide 2 (50 aa)
MLPLCPSYFHLMKTGFWLPSKMTECSMVRYQETLENYGTAVKVLLRSFDAP

>peptide 3 (59 aa)
HEQLPAESRLSASASAASSHLLAVAVPLRCTPTIQSRAHKIGLGTQCTVGLVMHSSKNV*

>peptide 4 (48 aa)
MRFSREEFVGSAFIAFGITLFVGFFYAAIVSKLLPPYENRLLAAIQND*

Sequence

>CNT30342892
CACATGAACAACTGCCTGCAGAGAGCCGCCTCTCTGCTTCAGCCTCCGCCGCAAGCTCGCACCTCTTGGCTGTTGCCGTCCCCCTGCGCTGCACCCCGAC
CATCCAATCGAGGGCGCACAAGATCGGACTTGGAACGCAATGCACTGTTGGTCTGGTGATGCATTCATCCAAAAATGTGTGATCTGAATCACTGAAGCCT
CAACTGATTTCCCAAGGAAGGACTACTCATCTGAAGCCAAGGTATTGACCTGAAGATGCGTTTCTCTAGAGAAGAGTTTGTGGGATCGGCGTTCATTGCA
TTCGGCATCACATTGTTCGTGGGTTTCTTTTATGCTGCCATTGTGTCCAAGCTACTTCCACCTTATGAAAACCGGCTTCTGGCTGCCATCCAAAATGACT
GAATGCAGTATGGTCAGATATCAGGAGACACTGGAGAATTATGGCACCGCTGTTAAAGTACTACTGAGAAGTTTTGACGCCCCCTG