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Detailed information on CNT30342704


BLAST search results

BLAST vs Swiss-Prot:
sp|P84989|PSBO_POPEU, E-value = 7e-17

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30658659Eragrostis tefTriticum dicoccoides75.6265.9185.25549forward
CNT30681617Eragrostis tefTriticum urartu86.6452.5586.65629forward

Expression of CNT30342704

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MTSPVSGLLLVTLKVMLPVDDAAFLMFSLTSSSSSPRPPAGSATALSYPVEPPRPLGSRKDEPR*

>peptide 2 (70 aa)
MSLVFWNSGGAFLAMPSALTVKDVGSRQNFFMLYLPDLKGKESTPPSMVGHWFAVPVPFTSMYVLLWISS*

Sequence

>CNT30342704
CGAATTTTTGCATTAATTAATTGATAGATACAAGATGCCTCCTCCATTGTTCTCAAAAGTATTATTGCCACATGATAATTAACACGATTACGGACGGGCG
GTCGTCTAGTTAGACTCGAGCTGCGCGTACCAGACCCCCTGGATCTTGACATCCTTGGGCGCCTTGGCTCCCAGGTCGGTGTCGGACGGCTGCACGCTCT
CAAAGACGCCGATGACCTCTCCAGTGTCCGGGTTGCTCTTGGTGACGCTCAAGGTGATGTTGCCCGTGGACGACGCGGCGTTCTTGATGTTCTCCTTGAC
GAGCTCCTCCTCGTCTCCTCGTCCTCCGGCGGGGAGCGCGACGGCGTTGTCGTACCCGGTGGAGCCACCACGGCCCTTGGGGTCAAGGAAGGACGAGCCA
CGGTAGCTGGGCACGAGGAACGGCCCGCCGAAGCTCTCGGGCTTGCCGGTGGCGACGAGCTGCTTGACGCGGGCCCTCGATCTCGTCCAGGGTGTAGGTG
AGGCGGGTCATGAGCTTGGTCTTCTGGAACTCGGGCGGCGCGTTCTTGGCGATGCCCTCCGCCTTGACGGTGAAGGACGTCGGCTCAAGGCAGAACTTCT
TCATGTTGTACTTGCCGGACTTGAAGGGGAAGGAATCCACGCCGCCGTCGATGGTCGGGCACTGGTTCGCTGTGCCCGTGCCCTTCACCTCCATGTACGT
CTTGCTCTGGATCTCGTCGTAGGTGA