Detailed information on CNT30342562


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691263Eragrostis tefOryza sativa37.7411.0883.76117reverse complement

Expression of CNT30342562

Peptides detected in this lncRNA

>peptide 1 (33 aa)
STGTTASSASGGCASSTAPPSSTRPGPTRRPPS*

>peptide 2 (96 aa)
RRQGLPRHRRRGAARHRQLHLQVLARDQPAGHRHDARKVHGLEDPQGEVHGQEGERPRQASLVRNCSFFHSGEQQWLRRWLRCPIHTHARTHTHTL*

>peptide 3 (61 aa)
VDRDYRVIGVGGLRVIDSSTFKYSPGTNPQATVMMLGRYMGLRILKERSMVRKGNVHDKHH*

Sequence

>CNT30342562
CGTCGACAGGGACTACCGCGTCATCGGCGTCGGGGGGCTGCGCGTCATCGACAGCTCCACCTTCAAGTACTCGCCCGGGACCAACCCGCAGGCCACCGTC
ATGATGCTCGGAAGGTACATGGGCTTGAGGATCCTCAAGGAGAGGTCCATGGTCAGGAAGGGGAACGTCCACGACAAGCATCATTAGTTCGTAACTGTTC
GTTCTTTCATTCAGGAGAGCAGCAATGGCTGAGACGATGGTTAAGGTGTCCAATACACACGCACGCACGCACGCACACACACACACTATAAACGTGAAAA
GGACCGGTCC