Detailed information on CNT30342137


BLAST search results

BLAST vs Swiss-Prot:
sp|Q84N29|NLTP3_WHEAT, E-value = 4e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30136754Eragrostis tefLolium perenne43.8556.986.36132forward
CNT30371399Eragrostis tefOryza glumipatula48.1734.2883.45145forward
CNT30593112Eragrostis tefEragrostis curvula49.1749.8389.86148forward

Expression of CNT30342137

Peptides detected in this lncRNA

>peptide 1 (89 aa)
VGGHADGEWHVDAALGGGAGDGAHVDLADGAGEALEAAAHGLTVSAGARHAVEAAHAAAARRGERATARRVRDARRQARTHLTAGDRRL*

>peptide 2 (41 aa)
SVDMLMGNGTLTPHLAGAPATVPMLILPTVPARLLRQRHTA*

>peptide 3 (32 aa)
MLLRPRMPLQHAGVSVPRPVAYGMHGARLEPT*

Sequence

>CNT30342137
AGTCGGTGGACATGCTGATGGGGAATGGCACGTTGACGCCGCACTTGGCGGGGGCGCCGGCGACGGTGCCCATGTTGATCTTGCCGACGGTGCCGGCGAG
GCTCTTGAGGCAGCGGCACACGGCCTGACGGTCAGCGCTGGTGCGCGCCATGCTGTTGAGGCCGCGCATGCCGCTGCAGCACGCCGGGGTGAGCGTGCCA
CGGCCCGTCGCGTACGGGATGCACGGCGCCAGGCTCGAACCCACCTGACCGCAGGTGATCGCCGCCTCTGACACCTCCGACGCCAGCAGCGCGACCACCA
C