Detailed information on CNT3034209


BLAST search results

BLAST vs Swiss-Prot:
sp|P13708|SUS_SOYBN, E-value = 1e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30404513Theobroma cacaoBeta vulgaris33.722.9882.4291forward
CNT30361762Theobroma cacaoSorghum bicolor36.6730.1881.8299forward

Expression of CNT3034209

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MGILPRNFSRVQGSAVSPQPLSKPISWNLCSNSAYGVPAGSVLRYSSAFLKTCWREFRF*

>peptide 2 (88 aa)
TSVGVPQNIVLSKVSMGSKNHNIEDHGNSTKELLKGARVSGITPTSLQANFLELVLEFGIWCPSGQCTEILLCLSQNMLERIQVLNSVI

Sequence

>CNT3034209
CCACCAGTGTCGGGGTACCCCAAAACATTGTCCTGAGCAAAGTATCCATGGGGAGTAAGAATCACAACATTGAAGACCATGGGAATTCTACCAAGGAACT
TCTCAAGGGTGCAAGGGTCAGCGGTATCACCCCAACCTCTCTCCAAGCCAATTTCCTGGAACTTGTGCTCGAATTCGGCATATGGTGTCCCAGCGGGCAG
TGTACTGAGATACTCCTCTGCCTTTCTCAAAACATGTTGGAGAGAATTCAGGTTTTGAATTCTGTCATTC