Detailed information on CNT30342068


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30403020Eragrostis tefBeta vulgaris13.4225.2786.9669forward
CNT30653503Eragrostis tefRosa chinensis13.2326.8886.7668forward
CNT30214655Eragrostis tefHelianthus annuus15.5636.8788.7580forward

Expression of CNT30342068

Peptides detected in this lncRNA

>peptide 1 (63 aa)
RRTTMRARRRGWRGRRGGGGRRGASARGPKALVEGRVPPVSQHRSDFPSLFARYAYNISGDLV*

>peptide 2 (38 aa)
MIQSGLKMRFWTTSMMSESAVYACEGFMVRERFNLKCN*

>peptide 3 (45 aa)
MARSARRRRSSRSLREGAQGFGRRAGSSRLPAPKRLPQLVCEICI*

Sequence

>CNT30342068
CGGCGCACGACGATGAGAGCTAGAAGGAGGGGATGGCGCGGTCGGCGCGGCGGAGGAGGTCGTCGCGGAGCCTCCGCGAGGGGGCCCAAGGCTTTGGTCG
AAGGGCGGGTTCCTCCCGTCTCCCAGCACCGAAGCGACTTCCCCAGCTTGTTTGCGAGATATGCATATAACATATCAGGGGATTTAGTCTAGTGGTAAGA
TATTCGCTTAGGGAGCGAAAGGTCCCGAGTTCAATTCTCGGAATCCCCAACCCCAAATCCTTTTTGCAGTGCATGGCAATGCAAATTCAGATCCTAGGAT
GATCCAGAGTGGCCTGAAGATGAGGTTTTGGACCACAAGCATGATGTCAGAGAGTGCTGTATATGCATGTGAGGGTTTTATGGTCAGAGAGAGGTTTAAC
CTGAAGTGTAACTAGATGCCAAGGCTGTCACGGGTGTGGCTGTAGCTTTGTATTGGCATGTAATAACTATAACGTGTTGCGGTGCTTATGTGCTCTGGTA
GACTGGTATTGGAG