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Detailed information on CNT30341981

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30680520	Eragrostis tef	Triticum urartu	23.58	5.6	90.74	162	reverse complement
CNT30100822	Eragrostis tef	Oryza rufipogon	23.73	63.18	89.57	163	reverse complement
CNT30578173	Eragrostis tef	Oryza barthii	23.58	4.77	90.12	162	reverse complement

Expression of CNT30341981

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MRMEEGKHSMSQERGEGPPPYSWRDEGIHSPDSRSHMISGI*

>peptide 2 (39 aa)
MSSSRTSHLNLKQRHIMLCSMRFSMTYQTTAVSSAPVPL*

Sequence

>CNT30341981
AACCAATGGTACATTGCATGCTTGCTTCGAAATGATTTGCAACAATTGGATAAATTGTTTCCATTGAGAGCCAAGATTTAGTACAGAGTGTGGAGGATTA
AAAAAGTTGGCATCTACCTGCCAAACCCTGTTTATCGCTTTGTCCCGTGTTACATCACAGACTAAGGTCAACTCTTTGTGGCTTTGTCCCGTGTTACATC
ACCCAAAGGTCTTCATGTCCTCATCGAGAACATCCCACCTAAATTTGAAGCAAAGACACATAATGTTGTGTTCCATGAGATTTTCAATGACATATCAAAC
AACTGCTGTTAGTTCTGCTCCAGTGCCATTATAACAAGTTATTGCCCAAACTGGTCTTTTTTGGTTGTTCTGGCCGGCCTACTACGGGCACCTATGGGGA
TTAGTGAGTGAGACCGCGATCCACAAACTGACGCATGAGACTCACCCTCGACTTGAGATGAGAATGGAAGAAGGAAAACATAGCATGTCACAAGAGCGAG
GCGAGGGGCCTCCGCCCTACAGCTGGAGGGACGAAGGTATACATTCTCCAGATTCCAGAAGCCATATGATATCAGGCATATGAACAGATAGACATTTTGC
CATTTTCATGTAATGCCAGCTACAAAGTTCTGAAGCTGACTGTCTCATAATCCTTGGCTGTGTCAGATAGACTTGCAATTATTGGAC