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Detailed information on CNT30341749

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 7e-30

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30549166	Eragrostis tef	Ipomoea triloba	76.18	50.45	80.24	339	forward
CNT30516897	Eragrostis tef	Juglans regia	59.33	29.86	82.58	264	forward
CNT30700805	Eragrostis tef	Quercus lobata	47.87	70.3	83.1	213	forward
CNT30616458	Eragrostis tef	Sesamum indicum	59.55	35.96	81.89	265	forward
CNT30524942	Eragrostis tef	Phaseolus vulgaris	59.1	39.2	81.75	263	forward
CNT30628702	Eragrostis tef	Vigna unguiculata	58.43	37.96	81.15	260	forward
CNT30506119	Eragrostis tef	Nicotiana attenuata	40.9	45.61	82.97	182	forward
CNT30710529	Eragrostis tef	Glycine max	61.12	48.23	82.35	272	forward
CNT3042435	Eragrostis tef	Prunus dulcis	82.7	53.18	81.52	368	forward
CNT3091192	Eragrostis tef	Solanum tuberosum	70.56	45.31	81.53	314	forward
CNT30591858	Eragrostis tef	Musa acuminata	80.22	70.41	79.83	357	forward
CNT3088002	Eragrostis tef	Vigna radiata	59.1	49.62	81.37	263	forward
CNT30508722	Eragrostis tef	Solanum lycopersicum	71.24	61.79	80.76	317	forward
CNT30554580	Eragrostis tef	Oryza glaberrima	75.28	49.26	88.36	335	forward
CNT30145737	Eragrostis tef	Medicago truncatula	59.1	42.69	83.65	263	forward
CNT30442780	Eragrostis tef	Aegilops tauschii	90.11	50.57	86.53	401	forward
CNT30312353	Eragrostis tef	Camelina sativa	59.1	64.15	82.13	263	forward
CNT30605857	Eragrostis tef	Gossypium raimondii	81.57	44.76	83.2	363	forward
CNT30205103	Eragrostis tef	Helianthus annuus	61.8	38.84	82.91	275	forward
CNT30625502	Eragrostis tef	Daucus carota	62.7	34.28	80.65	279	forward
CNT30688162	Eragrostis tef	Triticum urartu	89.66	59.38	86.97	399	forward
CNT30476914	Eragrostis tef	Arabidopsis halleri	57.75	45.89	82.49	257	forward
CNT30620243	Eragrostis tef	Cajanus cajan	39.55	53.01	85.8	176	forward
CNT30596739	Eragrostis tef	Oryza meridionalis	78.65	53.85	88.57	350	forward
CNT30354818	Eragrostis tef	Lactuca sativa	48.31	41.11	82.79	215	forward
CNT30154777	Eragrostis tef	Prunus persica	82.7	46	81.25	368	forward
CNT30410012	Eragrostis tef	Papaver somniferum	82.7	96.84	79.35	368	forward
CNT3027877	Eragrostis tef	Theobroma cacao	44.94	50.63	85.5	200	forward
CNT30330867	Eragrostis tef	Dioscorea rotundata	61.57	37.9	82.85	274	forward
CNT30577473	Eragrostis tef	Oryza barthii	78.65	64.22	88.29	350	forward
CNT30176441	Eragrostis tef	Vigna angularis	59.1	43.47	80.99	263	forward
CNT30335475	Eragrostis tef	Cynara cardunculus	62.7	21.48	83.51	279	forward

Expression of CNT30341749

Peptides detected in this lncRNA

>peptide 1 (54 aa)
SEKSDCMDSSLGCLESKHAKDCTWLMKDCSLVKLDCSSAKLGCNLVMSGCNQEK*

>peptide 2 (53 aa)
MRVMSGCMRVMSDCMKEMSGCMMGMWGCMKEMWGCMKEMWGCSLAMLDYSSEM*

Sequence

>CNT30341749
GTTCGGAGAAGTCTGACTGTATGGACTCATCCTTGGGCTGCTTGGAGAGTAAGCATGCGAAGGACTGTACTTGGCTGATGAAGGATTGTAGCTTGGTGAA
GTTGGACTGTAGTTCGGCGAAGTTGGGCTGTAACTTGGTGATGTCGGGCTGTAACCAGGAGAAGTAGGGCTGTATGCAGGCGATGTAGGGCTGTATGAGG
GTGATGTAGGGCTGTATGAGGGTGATGTCGGGCTGTATGAGGGTGATGTCGGACTGTATGAAGGAGATGTCGGGCTGTATGATGGGGATGTGGGGCTGTA
TGAAGGAGATGTGGGGCTGTATGAAGGAGATGTGGGGCTGTAGCTTGGCGATGTTGGACTATAGCTCGGAGATGTAGGGCTGTAACTTGGTGATGTGGGC
GAGTATGACGGACTGGTGGGTGAGTATGATGGACTTGTTGGCGAG