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Detailed information on CNT30341742


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6Z4N4|40G3_ORYSJ, E-value = 2e-44

BLAST vs NONCODE:
NONZMAT000139, E-value = 2e-28

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30287058Eragrostis tefTriticum aestivum12.3631.990.99111forward

Expression of CNT30341742

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MLHRHDTYISMVLFRRGLNLISSRAGSSSAGCHPRTMSPWRASKLR*

>peptide 2 (59 aa)
MSVTYAAVQQQYVHGCYIDMIRTSPWFCSVEGSISSVVGLDLPALVVTLAPCRRGGRRS*

Sequence

>CNT30341742
TGTAATTTATTGTTATACACATACAACTGCGACATATACACGACCATGATTAATTAAGCAGCCCGTCTCCTACTTTATCGATGCAGTAGGCAGGACAAGG
CTCAATTATTATCGTGTTATAAGATACACAGCGAAATCGATCGAGTAGCTTATGTCGGTCACATACGCTGCAGTCCAGCAGCAGTACGTACACGGATGCT
ACATAGACATGATACGTACATCTCCATGGTTTTGTTCCGTAGAGGGCTCAATCTCATCAGTAGTAGGGCTGGATCTTCCAGCGCTGGTTGTCACCCTCGC
ACCATGTCGCCGTGGAGGGCGTCGAAGTTGAGGTAGATATTGTTCACCATCCTGACGCAGCGGAAGCCGTTGCCGACGTCGCGGCTCTCCGTCCACAGCA
CGGACTCGTCCAGGTAGTCAGGGTTAGTACGTGCCTGGTAGTCGTCCTTGGGGTTGGCCGGGGCAAGGACGACCTTGCCGTTGCGGATGGACATGGCGTA
GTTGGGGTTGGCGCGGCAGTACCCCTTCACGGTGGGCTGCGGCGGGCGCGGGGGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNGCGGCAGTACCCCTTCACGGTGGGCTGCGGCGGCAGCGGGCGACCGCAGCCGTTGCCCTCGATGTTCACCTGAGACATCCCGTACGGCGCCGGCGG
CGCGTACCCCGGCGTGGCGATGGCGCCACCATAGCCGCCGTAGCTCTCACGCCCGTAGTAGGCCATGGTCACTATATGAGCAAGCACTTGTCCTGGTTCT
TGTTCCCCTGACTCGGCACTGCATGGGCGACGGGGCTGGGGATTTATAGGGGCTCTCGCGGATGCCGCGTTCCATTGGTGCGTGGCGTTAACATCACG