Detailed information on CNT30340274


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30291343Eragrostis tefTriticum aestivum101.719.8886.96299reverse complement
CNT30553137Eragrostis tefOryza glaberrima83.67102.590.65246forward
CNT30250642Eragrostis tefAvena sativa41.849.2391.06123reverse complement
CNT30680889Eragrostis tefTriticum urartu101.741.5986.62299forward
CNT30148014Eragrostis tefBrachypodium distachyon38.139.7295.54112reverse complement
CNT30575833Eragrostis tefOryza barthii10043.8891.5294reverse complement

Expression of CNT30340274

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MSTLISITHVSRRGIIENDFSFDSCTKVFLVFSIVI*

>peptide 2 (33 aa)
IISSSKTFTEQAEILLKEAIQEQLERFSLQEQT*

Sequence

>CNT30340274
AAATTATATCTTCTAGCAAGACATTCACCGAGCAAGCGGAAATCCTTTTGAAGGAAGCTATTCAGGAACAGCTTGAACGTTTTTCCCTTCAGGAACAAAC
ATAAATATAGCATGTCTACTCTTATTAGTATAACTCATGTTAGTAGAAGAGGAATCATTGAGAATGATTTTTCATTTGATTCATGCACAAAAGTTTTCTT
AGTTTTTAGTATAGTTATTTAAAGAATAGATAGAAAAAAGATTGCGTCCAATAGGATTTGAACTTATACCAAAGGTGTAGAAGACCTCTGTCCT