Detailed information on CNT30339792


BLAST search results

BLAST vs Swiss-Prot:
sp|P12653|GSTF1_MAIZE, E-value = 5e-25

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675196Eragrostis tefSetaria viridis25.1112.9996.4356forward
CNT30446496Eragrostis tefSaccharum spontaneum67.2650.6890.67150forward
CNT30361429Eragrostis tefSorghum bicolor42.617.492.6395forward

Expression of CNT30339792

Peptides detected in this lncRNA

>peptide 1 (73 aa)
VAGEVLGALVLAGAEVDGHDLVLGAGLLQRHRAPCHVPRHRRAVQLHRSHGLSLGLSSPLRRFGSSLPFSSSLA

>peptide 2 (73 aa)
LRARCSGLLCSPVPKLMGTISYSAPASSSATAHLVTFHDIVGPYSFIGAMASLSVSPLLSDASGLLSPFPPRSQ

Sequence

>CNT30339792
GTTGCGGGCGAGGTGCTCGGGGCTCTTGTGCTCGCCGGTGCCGAAGTTGATGGGCACGATCTCGTACTCGGCGCCGGCCTCCTCCAGCGCCACCGCGCAC
CTTGTCACGTTCCACGACATCGTCGGGCCGTACAGCTTCATCGGAGCCATGGCCTCTCTCTCGGTCTCTCCTCTCCTCTCCGACGCTTCGGGTCTTCTCT
CCCCTTTTCCTCCTCGCTCGCAG