Detailed information on CNT30339202


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674936Eragrostis tefSetaria viridis30.5732.4285.98107forward
CNT30618191Eragrostis tefSesamum indicum23.716.3987.9583forward
CNT30369486Eragrostis tefOryza glumipatula46.2918.3182.1162forward
CNT30574671Eragrostis tefOryza barthii46.2917.882.1162forward

Expression of CNT30339202

Peptides detected in this lncRNA

>peptide 1 (94 aa)
MNKKIDQIKVHATITLGVQQSTNARYIVQKINGSKRPMMFLLGRELGLDLVHVLIVDPEGLGQHVGGHRRRGTEQRHRNGLRALELAVEGGDDGG

Sequence

>CNT30339202
CCCAGACAAAAAAAAAAGACAACCCAATCTTATTGTCCTGAAGAGAACAAATTGTGTTACATATCATGAACAAGAAAATTGATCAAATCAAAGTGCACGC
TACAATCACACTCGGAGTTCAGCAATCAACAAACGCGAGGTATATAGTTCAGAAAATCAACGGATCCAAACGGCCGATGATGTTCCTACTTGGGCGCGAA
CTTGGCCTTGATCTCGTCCACGTCCTTATTGTCGATCCTGAAGGCCTTGGCCAGCACGTCGGTGGGCACCGGCGGCGTGGCACCGAACAGCGTCATCGCA
ATGGCCTGCGTGCCCTGGAGCTGGCTGTTGAAGGCGGCGATGACGGCGGC