Detailed information on CNT30339139


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT302340Eragrostis tefZea mays24.6812.4791.2357forward
CNT30367085Eragrostis tefSorghum bicolor20.3512.3791.4947forward
CNT30106587Eragrostis tefOryza longistaminata23.8114.1890.9155forward
CNT30579744Eragrostis tefEchinochloa crusgalli23.3810.6792.5954forward
CNT30604867Eragrostis tefOryza punctata32.4719.6386.6775forward

Expression of CNT30339139

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MRTKTLLFFISFHSGTKANGNMIMGDNLIER*

Sequence

>CNT30339139
ATGCGAACAAAAACCTTGCTCTTTTTCATCTCATTTCATAGCGGAACCAAAGCGAACGGTAACATGATCATGGGGGATAACCTAATCGAACGGTAACACG
GGACACTCAACAGTAACATGGATCCAAAGTGACACGATTTGGTGATAGATAACTAGGATAACTTGGCCGCAGGGGGCCCCACCCTTCAGTTCCTCCAGTT
CCCGCCGGAGTCCCCGCGGCTGCTGCCGTAG