Detailed information on CNT30338970


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30659938Eragrostis tefTriticum dicoccoides27.7727.6193.24148forward
CNT3067780Eragrostis tefLeersia perrieri26.6429.7195.77142forward
CNT30577064Eragrostis tefOryza barthii33.0223.0490.91176forward

Expression of CNT30338970

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MNKDHRVPIPSRSPQNQTTHAFIHLEHILIDGWIGAESNIRMALIIN*

>peptide 2 (48 aa)
MHELSSLTRTIIQAGFVSSQKIDVQVNALIHHWFIYYTSPRSSSSSPN*

>peptide 3 (46 aa)
MVCGPVVERALACGRGLHGEAEEGDHGEARVLDLRQLQPLLLLRVGR

Sequence

>CNT30338970
CCAACACCAAGACGATCCTCGAGTGGTCCCCTGATATAGACCACTGAAACAATGCATGAGCTGAGCTCTTTAACAAGAACAATTATCCAGGCCGGTTTCG
TATCATCCCAAAAGATCGATGTACAAGTGAATGCATTAATTCATCATTGGTTCATATATTACACATCACCAAGAAGTTCCAGCAGTTCTCCTAATTAACC
ATACATCCTCCATTAAGAACATGAACAAAGATCATCGTGTCCCCATACCCTCTCGCTCGCCACAAAATCAAACGACGCACGCGTTCATCCATCTCGAGCA
CATTCTCATCGACGGATGGATCGGAGCAGAAAGCAATATACGGATGGCCTTAATTATTAATTAAGAGGATCCGGAGGAGAAGGTGTCGAAGATGGTGTGT
GGCCCAGTTGTTGAGCGGGCCCTTGCCTGTGGCCGCGGCCTGCACGGCGAAGCCGAGGAAGGCGACCATGGCGAGGCGCGCGTGCTTGATCTCCGCCAGC
TGCAGCCGCTCCTTCTTCTCCGGGTCGGACGCG