Detailed information on CNT30338869


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30178523Eragrostis tefSecale cereale20.2514.2686.2580forward
CNT3011150Eragrostis tefZea mays23.0410.7687.9191forward
CNT30679781Eragrostis tefTriticum urartu20.2511.9287.580forward
CNT30582819Eragrostis tefEchinochloa crusgalli28.113.2992.79111forward

Expression of CNT30338869

Peptides detected in this lncRNA

>peptide 1 (88 aa)
MAIDPRTSGTVQVSRERKGEFNLDLAARALLRRQLRPLLDRQKVRRRVRADVGQQGAAALHGHGLDGDGGEGGHCARFGVYSSWRILVW

>peptide 2 (37 aa)
GSIRTRNFSRNKDNTKNVLEDAQHQFTCMTTSTVLTA*

Sequence

>CNT30338869
TGGTTCCATTCGCACTAGAAACTTTAGTCGCAACAAAGATAACACAAAAAACGTTTTAGAAGACGCACAACATCAGTTTACTTGTATGACAACGAGTACA
GTATTAACAGCATAAATGGGCATGTTCCATGGCGATCGATCCGAGAACTAGCGGTACGGTACAAGTAAGCAGGGAAAGGAAGGGGGAATTCAATCTAGAT
CTTGCCGCGCGGGCCCTTCTGCGGCGGCAGCTGCGGCCCCTTCTTGATCGGCAGAAGGTCCGGCGACGCGTTCGCGCTGACGTAGGCCAGCAGGGAGCCG
CCGCCCTTCACGGCCACGGGCTGGACGGAGACGGCGGCGAGGGAGGCCATTGCGCGCGGTTTGGTGTGTACAGCTCCTGGAGGATACTGGTGTGG