Detailed information on CNT30338568


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8VZC0|UXS1_ARATH, E-value = 8e-84

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30594668Eragrostis tefEragrostis curvula70.6697.9295.45330forward

Expression of CNT30338568

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MQGRRGGRSGRPRGEWARRHHGGAARTSDCGGGARRSLSSQ*

>peptide 2 (59 aa)
MGSTTSWRSSSNLGLRRWCATFSFLPVKKLSTTITLSPCSSRRSTRWLPTNPAPPVTTTR

>peptide 3 (34 aa)
MAEQLEPRIAEVVRDVLFPPSEEVVNHDHAVSLL*

Sequence

>CNT30338568
GACAGTAACACAGTTTGTAAACAAGGTATATAGAATATAGTATATAAGGAAGTACCAATAGGATTAACGTGCCCCCAGTAAGACTCCTTCTGTGGATGCT
CAAGTGGATCACCGTAAACTTCACTTGTGCTAGTCAATAAGAACCTTGCACCAATTCGCTTTGCCAGACCCAACATATTCAAGGTTCCCATGACATTAGA
TATGATTGTCTTGATCGGATTGTACTTGTAGTGCACAGGCGATGCAGGGCAGGCGAGGTGGTAGATCCGGTCGACCTCGAGGAGAATGGGCTCGACGACA
TCATGGCGGAGCAGCTCGAACCTCGGATTGCGGAGGTGGTGCGCGACGTTCTCTTTCCTCCCAGTGAAGAAGTTGTCAACCACGATCACGCTGTCTCCCT
GCTCTAGCAGACGGTCCACGAGGTGGCTGCCGACGAACCCGGCCCCGCCGGTCACAACGACGCGGCG